| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0391 |
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| Symbol | |
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| ID | 4449806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 436556 |
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| End bp | 438187 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639692408 |
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| Product | type IV pilus secretin PilQ |
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| Protein accession | YP_834038 |
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| Protein GI | 116688415 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAAC ACGGCTGTTG GCTATTTGCC ATCTGGGCCG GGGTGACGGC GGCCGACGCC
GGCGCGTCGT TGCCGCCGCT GCCCGCGGTC TGGCCCGCCG GGGCGACGGA TGTGTCGGTG
CCAGGCTTGC CGCAGTCGCT GCGCGTGGCC GACGGCGCGG ACGGTGCGGT AGCGCAGGAC
GCCGGCCCGC CGCCATTCGA TCAGGCGGCG CGCACGGCAC TGCCGACGGA AACCGCCGCA
ACGCCCCCCA CGCTGGAGGG ACCGCCGATC CCGCTGGCGC CGCCGGCCCG GATGAGCGAC
GCTGCGGCCC GGCAACCGGG CGATGCGGAC GACGCGCGGC GGATCTCGCT GAATCTGCAG
GGCGTCGGGC TCGCGGCCGC ATTCGACGCG ATCGCGCGGT TCACGGGGCT CAATATCGTC
GTCGGCGAGC AGGTGCGCGG CACGGTGACG TTACGTCTGA ATAATGTCCG CTGGCGCGAG
GCGTTCGACA CGCTGCTCGA CACGCACGGG CTCGCGATGT CCCGGCGCGG CAACGTGATT
TGGGTCACAC CGGCAGCCGA GCTGGCTGCG CGCGAACGCG AGCGCTTCGA AATGCATGCG
CGGGCCGCCG ATCTGGAGCC GCTCGCGAGC CGTACGTTCG TGCTGCACTA TCCCCGCGCG
CAGGACGTGC AACGGCTGCT GGCCGGCGCG ACCGGCCAGC GCCTGCTGTC GAAGCGCGGT
GCTGCTGCGG CCGATCCCCG CACGAACCTG CTGTTCGTCA CCGATCTCGC GCCGCGCATC
ACGCAGATCG CGGGCCTGAT CGATGCGATC GACCGGCCGT CGCGGCAGGT CCGGATCGAG
GCCCGCATCG TCGAAGGCGA GCAGGGTTTC TCGCGCAACC TTGGCGCCCG CGTCGCGCTG
CGTGCGCAGG GGCGGCCGCC AGCGGCCGAA GGCGCGTCCT TCACGGCGAA CGCACGCAAC
GCGCTCGACC TTGCCGCGCG GCCGCTCGGC GGCTTCGACG CGGCGACCGC CGGTTTCACG
CTGTTCGCCG CGCCACTCAG CCGCGTACTC GACATCGAAC TGAGCGCGCT CGAGGCGCAG
GGACGGGGCC AGATCGTTTC GCGTCCGCGG GTGGTGACGG CCGATCGCGT CAAGGCCATC
GTCGAACAGG GTTCCGAGCT GCCGTACCAG GCGAAGGTCG GCAACGGCAT GAGCGGTGTG
CAGTTCCGCC GCGCGACGCT CAAGCTCGAA GTCGAGCCGC AAATCACGCC GGACGGGCGC
GTGGTGCTCG ATCTCGACGT GACGAAGGAC AGCGTCGGCG AGCCGACCGC GGCCGGCCCC
GCCATCCATA CGAAGCATGT GCAAACGCGC GTCGAGGTCG AGAATGGCGG GACGGTCGCG
ATCGGCGGCA TCTATGAACA ACTGAACCGG AACGATGTGA CGCGGGTGCC ACTCTTGGGC
AAAATACCGT TTCTGGGCGC GCTTTTCAGG CACCGCGCGC AGCGCGACCA GCGCAACGAA
CTGGTCGTTT TCATCACGCC GACCGTCGTC GATGCGCGTT GCGGCGCACC CGGCGCGGGC
GACGCGGATG CCGAGGAAAC GGGGCCGGAA GCCGCCGGCG CAGGCTCGAC AAGGCAGCCG
CTTTGCCAGT AA
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| Protein sequence | MTKHGCWLFA IWAGVTAADA GASLPPLPAV WPAGATDVSV PGLPQSLRVA DGADGAVAQD
AGPPPFDQAA RTALPTETAA TPPTLEGPPI PLAPPARMSD AAARQPGDAD DARRISLNLQ
GVGLAAAFDA IARFTGLNIV VGEQVRGTVT LRLNNVRWRE AFDTLLDTHG LAMSRRGNVI
WVTPAAELAA RERERFEMHA RAADLEPLAS RTFVLHYPRA QDVQRLLAGA TGQRLLSKRG
AAAADPRTNL LFVTDLAPRI TQIAGLIDAI DRPSRQVRIE ARIVEGEQGF SRNLGARVAL
RAQGRPPAAE GASFTANARN ALDLAARPLG GFDAATAGFT LFAAPLSRVL DIELSALEAQ
GRGQIVSRPR VVTADRVKAI VEQGSELPYQ AKVGNGMSGV QFRRATLKLE VEPQITPDGR
VVLDLDVTKD SVGEPTAAGP AIHTKHVQTR VEVENGGTVA IGGIYEQLNR NDVTRVPLLG
KIPFLGALFR HRAQRDQRNE LVVFITPTVV DARCGAPGAG DADAEETGPE AAGAGSTRQP
LCQ
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