Gene Bcen2424_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0387 
Symbol 
ID4449802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp431515 
End bp433908 
Gene Length2394 bp 
Protein Length797 aa 
Translation table11 
GC content67% 
IMG OID639692404 
Product1A family penicillin-binding protein 
Protein accessionYP_834034 
Protein GI116688411 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.495893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTATGC AATCCACGAC TCCTACGTCC CCGCCTCCCG CCCCGGAGCC GAAGAAGCGG 
CCCTGGTGGC AAAAAGTCCT GCTCGGCTTC GCCGCGATGT GCGTGGCCCT CGTCGTGGCC
GGCGGCCTCG TGCTCGGCTA CGCGCTCGTC GTGGCCTGGC CGAACATGCC GTCGCTCGAC
GCGCTGACCG ACTACCGCCC GAAGGTGCCG CTGCGCATCT ATACGTCCGA TCATGTGCTG
ATCGGCGAAT TCGGCGAGGA GCGCCGCGAC GTCGTCCATT TCAAGGACGT GCCCGACTCG
CTGAAGAAGG CGATTCTCGC GATCGAGGAC GCACGCTTCT ACGATCACGG CGGCGTCGAC
CTCACCGGCA TCATCCGCGC CGGCTTCGTC GCGCTGACGA ACGGCCACGC GTCGCAGGGC
GCGAGCACGA TCACGATGCA GGTCGCGCGC AACTTCTTCC TGTCGAGCGA GAAGACCTAC
ACGCGCAAGA TCTACGAGAT GCTGCTCGCG TACCGGATCG AGCGCGCGCT GACGAAGGAT
CAGATTCTCG AGGTCTACAT GAATCAGATC TATCTCGGCC AGCGCGCGTA CGGCTTCGCG
AGCGCCGCGC GGGTCTATTT CGGCAAGGAC CTGAAGGACA TCACGCTCGC GGAAGCCGCA
ATGCTCGCGG GGCTGCCGAA GGCGCCGTCC GCGTATAACC CGGTCGTCAA CCCGAAGCGC
GCGAAGGTGC GCCAGGAATA CATCCTGCAG CGGATGCTCG AGCTGAACTT CATCACGCGC
GAGCAGTACG ACGAAGCCGC CGCGCAGCCG CTCGTCGTCA AGGGGCCGGG CCGCGATTTC
AGCGTGCACG CCGAGTACGT CGCGGAAATG GTCAGACAGA TGATGTACGC GCAGTATCGC
GAGGAAACCT ACACGCGCGG CTTCAACGTC GTCACGACGA TCGATTCCGC GGACCAGCAG
GTCGCGTACA CCGCGCTGCG CAAGGGCATC ATGGATTACG AGCGCCGCCA CGGCTATCGC
GGGCCGGAAG GCTTCATCGA GCTGCCGGCC GGCGCCGACG ATCGCGAACA GGCGATCGAC
GACGCGCTGC TCGAGCATCC CGACAACGGC GAGCTGATCG CCGCGGTCGT GACGGCCGCG
AGCCCGCGCC AGATCACGGT GGCGTTCATC GACGGCAGCA CGGCGACGAT CGAGGGCGAC
AACCTGCGCT TCGCGTCGGG CGCGCTGTCG ACCAACGCGC AGCCAAACCG CCGCATCCGC
CCCGGCGCGA TCGTCCGCGT CGTGAAGAAC GACGCCGGCA AATGGTCGAT CACGCAGTTG
CCGCAGGTCG AAGGCGCGTT CCTGTCGATC GTCCCGCAGG ACGGGGCGAT CCGCTCGCTC
GTCGGCGGCT TCGACTACAA CAAGAACAAG TTCAACCACG TCACGCAGGC GTGGCGGCAA
CCGGGTTCGT CGTTCAAGCC GTTCATCTAC TCGGCCTCGC TCGACAAGGG CCTCGGCCCG
GCGACCGTCA TCAACGACGG CCCGCTGTAT TTCAGCGCCG CGGAAACGGG CGGCCAGCCG
TGGGAGCCGA AGAACTACGG CGGCGGCTTC GAGGGCCCGA TGTCGATGCG CACCGCGCTG
CAGCGCTCGC GCAACCTCGT GTCGATCCGG ATTCTCAACA ACATCGGCAC GAAATACGCG
CAGCAATACA TCACGCGCTT CGGCTTCGAC GCCGATCGCC ATCCGGCCTA CCTGCCGATG
GCGCTCGGCG CCGGCCAGGT CACGCCGCTG CAGATGGCCG GCGCGTACTC GGTCTTCGCG
AACGGCGGCT ATCGCGTCAA TCCGTACCTG ATCGCCGAGG TCACCGATCC GAACGGCGCG
ATCGTCGCGC GCGCGCAGCC GCTCGTCGCG GAGCAGAACG CGCCGCGCGC GATCGACGCA
CGCAACGCCT ACGTGATGAA CAGCCTGCTG CAGAGCGTCG CGCAGCGCGG CACGGGCGCA
CGGACCAACG TGCTCAAGCG CACCGACCTC GCGGGCAAGA CCGGCACGAC GAACGACTCG
CACGACGCGT GGTTCGCCGG CTACCAGCAC ACGCTCGCCG CAATCGCGTG GATCGGCTAC
GACAATCCGC GCAGCCTCGG CGATCGCGAA ACCGGCGGCG GCCTGTCACT GCCGGTCTGG
ATCGAGTACA TGGGTGCGGC GCTGAAGGGC GTGCCCGAGT TCAAGCCGAC GGTGCCGGAC
GGTGTCGAAT CGCTCGGCGG CGAGCTGTAC TTCACCGAGT TCACGCCGGG GCACGGCTTC
GTGTCGACGG TCGGCGTGCC GCAGGCGCCG GCCGCGCAAA ACGTCGACGA GGCCGTGCCG
CACGTCGACG AGCAGGAAAA GCAGGACATC ATGAACCTGT TCCGCGGCCA CTGA
 
Protein sequence
MPMQSTTPTS PPPAPEPKKR PWWQKVLLGF AAMCVALVVA GGLVLGYALV VAWPNMPSLD 
ALTDYRPKVP LRIYTSDHVL IGEFGEERRD VVHFKDVPDS LKKAILAIED ARFYDHGGVD
LTGIIRAGFV ALTNGHASQG ASTITMQVAR NFFLSSEKTY TRKIYEMLLA YRIERALTKD
QILEVYMNQI YLGQRAYGFA SAARVYFGKD LKDITLAEAA MLAGLPKAPS AYNPVVNPKR
AKVRQEYILQ RMLELNFITR EQYDEAAAQP LVVKGPGRDF SVHAEYVAEM VRQMMYAQYR
EETYTRGFNV VTTIDSADQQ VAYTALRKGI MDYERRHGYR GPEGFIELPA GADDREQAID
DALLEHPDNG ELIAAVVTAA SPRQITVAFI DGSTATIEGD NLRFASGALS TNAQPNRRIR
PGAIVRVVKN DAGKWSITQL PQVEGAFLSI VPQDGAIRSL VGGFDYNKNK FNHVTQAWRQ
PGSSFKPFIY SASLDKGLGP ATVINDGPLY FSAAETGGQP WEPKNYGGGF EGPMSMRTAL
QRSRNLVSIR ILNNIGTKYA QQYITRFGFD ADRHPAYLPM ALGAGQVTPL QMAGAYSVFA
NGGYRVNPYL IAEVTDPNGA IVARAQPLVA EQNAPRAIDA RNAYVMNSLL QSVAQRGTGA
RTNVLKRTDL AGKTGTTNDS HDAWFAGYQH TLAAIAWIGY DNPRSLGDRE TGGGLSLPVW
IEYMGAALKG VPEFKPTVPD GVESLGGELY FTEFTPGHGF VSTVGVPQAP AAQNVDEAVP
HVDEQEKQDI MNLFRGH