| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0342 |
|---|
| Symbol | |
|---|
| ID | 4449741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 398447 |
|---|
| End bp | 400294 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639692359 |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_833989 |
|---|
| Protein GI | 116688366 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGCG CCCTCGAAAT ACTCGACGAA GTCTTTGGTT ATTCCGCCTT TCGCGGCCAG
CAGGGCGAGA TCGTCGAGCA CGTCGCCGGC GGCGGCGATT GTCTCGTGCT GATGCCGACC
GGCGGCGGCA AGTCGCTGTG CTACCAGATT CCCGCGCTGC TGCGCCGAGA GGCCGGGCAG
GGCGCCGGCA TCGTCGTGTC GCCGCTGATC GCGCTGATGC AGGACCAGGT CGCCGCGTTG
AGCGAAGTCG GCGTGCGCGC GGCCTACCTG AATTCGACGC TGTCGGGCGC CGAGGCCGCG
GCCACCGAGC GCGCGCTGCG CGAAGGCGAA ATCGACCTGC TGTACGTCGC GCCGGAGCGC
TTGATGACGG GGCGCTTCCT CGAGCTGCTC GAGCGCGCGA AGATCGGCCT GTTCGCGATC
GACGAAGCGC ACTGCGTGTC GCAATGGGGG CACGATTTCC GCCCGGAATA CATCCAGCTG
TCGGTGTTGC ACGAGCGCTT CCCGTCGGTG CCGCGCATCG CGCTGACCGC CACGGCCGAC
GCGATCACGC GCGACGAGAT CATCCATCGT CTCGCGCTCG ACGACGCGCG CGTGTTCGTG
TCGAGCTTCG ACCGCCCCAA CATCCGTTAC CGGATCGTCG AAAAGGACAA CGCGCGCTCG
CAGTTGCTCG ATTTCATCCG TGCCGAGCAC ACGAATGCCG ACGGCACGAC GGACGCGGGC
GTCGTCTATT GCCTGTCGCG TCGCAAGGTC GAGGAAACGG CCGAATGGCT GAAGGCGCAG
GGCGTGCGCG CGCTGCCGTA TCACGCGGGG ATGGAGTTCG AGGTGCGGCA GAAGCACCAG
GAAATGTTCC AGCGCGAGGA AGGCATCGTG ATGTGCGCGA CGATCGCGTT CGGCATGGGT
ATCGACAAGC CCGACGTGCG CTTCGTCGCG CACCTCGATT TACCGAAGAG CGTCGAAGGC
TATTACCAGG AAACCGGCCG CGCGGGTCGT GACGGGATGC CCGCCAACGC GTGGATGGCG
TATGGCCTCG GCGATGTCGT CCAGCAGCGC AAGATGATCG ACGAATCCGA TGCGGACGAC
GCGCACAAGC GCGTGCAGAC GTCGAAGCTC GACGCGCTGC TCGGGTTGTG CGAAACGATC
TCGTGCCGCC GCGTGCGGCT GCTGAATTAC TTCGGCGAGG CGAGCCAGCC GTGCGGCAAC
TGCGACACGT GCCTCGAGCC GCCCGCTTCG TGGGATGCGA CGCGTGAGGC GCAGATGGCG
CTGTCGTGCG TGTTCCGCGC ACAGCGCGCG AGCGGCTTCA ATTTCGGCTC GAGCCACCTG
ATCGAGATCC TGCGCGGCGG GCGCACCGAG AAGGTTTTGC AGCGCGGCCA CGACCAGCTC
AGCACGTTCG GCATCGGCGC GGCGCTGTCC GAGCCCGAGT GGCGCGCGAT TTTCCGGCAA
CTGGTCGCGT ACGGCTACCT GGCGGTCGAC CATGGCGGCT TCGGCGCGCT GATGCTGACC
GAGGCCGCGA AGCCCGTGCT GAAGAACGAG GAAAAGGTCA CGTTGCGCCG CTACGTGAAG
CCGCAGCGCA CCCGCCAGTC GTCGAGCCGC AGCGGCACGC GCGTCGACCC GACGGCCGGC
ATGGGCGCCC GCGAGCGCGC GCGGTGGGAC GCGCTGCGCG CATGGCGCGC GGAAACCGCG
AAGACGGACG GCGTGCCGGC CTACGTGATC TTCCACGACG CGACGCTCGC CGAAATCGCG
CGCAACGCGC CGGAGACGAT CGACGACCTG CGTCACATCC CCGGCATGGG CGTGCGCAAG
CTGGAACGCT TCGGTGACGA GATCATCGAC GTCGTCGAAT CGGCCTGA
|
|---|
| Protein sequence | MSRALEILDE VFGYSAFRGQ QGEIVEHVAG GGDCLVLMPT GGGKSLCYQI PALLRREAGQ
GAGIVVSPLI ALMQDQVAAL SEVGVRAAYL NSTLSGAEAA ATERALREGE IDLLYVAPER
LMTGRFLELL ERAKIGLFAI DEAHCVSQWG HDFRPEYIQL SVLHERFPSV PRIALTATAD
AITRDEIIHR LALDDARVFV SSFDRPNIRY RIVEKDNARS QLLDFIRAEH TNADGTTDAG
VVYCLSRRKV EETAEWLKAQ GVRALPYHAG MEFEVRQKHQ EMFQREEGIV MCATIAFGMG
IDKPDVRFVA HLDLPKSVEG YYQETGRAGR DGMPANAWMA YGLGDVVQQR KMIDESDADD
AHKRVQTSKL DALLGLCETI SCRRVRLLNY FGEASQPCGN CDTCLEPPAS WDATREAQMA
LSCVFRAQRA SGFNFGSSHL IEILRGGRTE KVLQRGHDQL STFGIGAALS EPEWRAIFRQ
LVAYGYLAVD HGGFGALMLT EAAKPVLKNE EKVTLRRYVK PQRTRQSSSR SGTRVDPTAG
MGARERARWD ALRAWRAETA KTDGVPAYVI FHDATLAEIA RNAPETIDDL RHIPGMGVRK
LERFGDEIID VVESA
|
|---|
| |