| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0340 |
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| Symbol | rpoB |
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| ID | 4449739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 389800 |
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| End bp | 393906 |
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| Gene Length | 4107 bp |
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| Protein Length | 1368 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639692357 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_833987 |
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| Protein GI | 116688364 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATATT CCTTCACCGA GAAGAAGCGC ATTCGCAAGA GTTTCGCGAA GCGCCCCATC
GTTCACCAAG TTCCGTTCTT GCTGGCTACC CAGCTTGAAT CATTCAGCAC GTTTCTGCAA
GCCGATGTAC CCGCGACGCA ACGTAAGCCT GAGGGTTTGC AGGCCGCGTT CACGTCGGTA
TTTCCCATTG TTTCGCACAA CGGTTTCGCG CGCCTCGAGT TCGTGAGCTA TGCGCTGTCC
TCGCCGGCAT TCAACATCAA GGAATGCCAG CAGCGTGGCC TGACGTACTG CTCCGCGCTG
CGCGCGAAGG TCCGCCTCGT CATTCTCGAC AAGGAATCGC CGAACAAGCC GGTCGTCAAG
GAAGTGAAGG AGCAGGAAGT GTACATGGGC GAAATTCCGC TCATGACGCC GACGGGCTCG
TTCGTCATCA ACGGCACCGA GCGTGTCATC GTCTCGCAGC TGCACCGTTC GCCGGGCGTG
TTCTTCGAAC ACGACAAGGG CAAGACGCAC AGCTCGGGCA AGCTGCTGTT CTCGGCACGG
ATCATTCCGT ACCGCGGCTC GTGGCTCGAC TTCGAATTCG ATCCGAAGGA CATCCTGTAC
TTCCGCGTCG ACCGTCGCCG CAAGATGCCG GTCACGATCC TGCTGAAGGC CATCGGCCTG
ACGCCGGAAC AGATCCTCGC GAACTTCTTC GTGTTCGACA ACTTCACGCT GATGGACGAA
GGCGCGCAAC TCGAGTTCGT GCCCGAGCGC CTGCGTGGTG AAGTCGCGCG TTTCGACATC
ACGGATCGCG ACGGCAAGGT CATCGTCCAG AAGGACAAGC GGATCAACGC GAAGCACATT
CGTGACCTCG AAGCCGCGAA GACCAAGTTC ATCTCGGTGC CGGAAGACTA TCTGCTCGGC
CGCGTGCTGG CGAAGAACGT CGTCGACGGC GATACCGGCG AAGTGATCGC GAGCGCGAAC
GACGAAGTCA CGGAAAGCGT GCTCGAGAAG CTGCGCGAAG CGGGCATCAA GGACATCCAG
ACGCTCTACA CGAACGATCT GGACCAGGGC CCGTACATCT CGTCGACGCT GCGTGTCGAC
GAAACGACCG ACAAGACGGC CGCGCGCATC GCGATCTACC GCATGATGCG TCCGGGCGAG
CCGCCGACCG AAGAAGCGGT CGAGGCCCTG TTCAATCGTC TGTTCTACAG CGAAGAAGCG
TACGACCTGT CGAAGGTTGG CCGCATGAAG TTCAACCGCC GCGTCGGCCG TGACGAGATC
GTCGGCCCGA TGACGCTGCA GGACGACGAC ATCCTCGCGA CGATCAAGAT CCTCGTCGAG
TTGCGCAACG GCAAGGGCGA AGTGGACGAC ATCGACCACC TCGGCAACCG TCGCGTGCGT
TGCGTCGGCG AACTGGCGGA AAACCAGTTC CGCGCCGGCC TCGTGCGTGT CGAGCGCGCG
GTCAAGGAAC GCCTCGGCCA GGCCGAAAGC GAAAACCTGA TGCCGCACGA CCTGATCAAC
TCGAAGCCGA TTTCGTCGGC GATCCGCGAG TTCTTCGGTT CGTCGCAGCT GTCGCAGTTC
ATGGACCAGA CCAACCCGCT GTCGGAAATC ACGCACAAGC GCCGTGTGTC CGCACTGGGC
CCGGGCGGTC TGACCCGCGA GCGCGCAGGC TTCGAAGTCC GCGACGTGCA CCCGACCCAC
TACGGCCGCG TGTGCCCGAT CGAAACGCCG GAAGGTCCGA ACATCGGCCT GATCAACTCG
CTCGCACTGT ACGCGCACCT GAACGAATAC GGCTTCCTCG AGACGCCGTA CCGCAAGGTC
GTGGACAGCA AGGTGACCGA CCAGATCGAC TACCTGTCGG CGATCGAGGA AGGCCGCTAC
ATGATCGCCC AGGCGAACGC CGCGATCGAC GAGAACGGCC AGCTGATCGA CGAACTCGTG
TCGTCGCGCG AAGCCGGCGA AACGATGATG GTCACGCCGG ACCGGATCCA GTACATGGAC
GTCGCGCCGT CGCAGATCGT GTCGGTGGCA GCCTCGCTGA TCCCGTTCCT CGAGCACGAT
GACGCGAACC GTGCATTGAT GGGTTCGAAC ATGCAGCGTC AGGCCGTGCC GTGTCTGCGT
CCGGAAAAGC CGGTCGTCGG GACGGGCATC GAGCGCACCT GCGCGGTCGA CTCGGGTACG
ACGGTTCAGG CGTTCCGCGG CGGTGTGGTC GACTACGTCG ACGCAGGCCG TATCGTGATT
CGCGTGAACG ACGACGAAGC GGTCGCGGGT GAAGTCGGTG TCGACATCTA CAACCTGATC
AAGTACACGC GTTCGAACCA GAACACGAAC ATCAACCAGC GTCCGATCGT GAAGATGGGC
GACAAGGTCT CGCGCGGCGA CGTGCTGGCC GACGGCGCCT CGACGGACCT GGGCGAGCTC
GCGCTCGGCC AGAACATGCT GATCGCGTTC ATGCCGTGGA ACGGCTACAA CTTCGAGGAT
TCGATCCTGA TCTCGGAGAA GGTGGTCGCG GACGATCGCT ACACGTCGAT CCACATCGAA
GAGCTGAACG TCGTTGCACG CGACACGAAG CTCGGGCCGG AAGAAATCAC GCGCGACATC
TCGAACCTGG CGGAAGTCCA GCTCGGCCGT CTCGACGAAT CGGGCATCGT GTACATCGGT
GCTGAAGTCG AAGCAGGCGA CGTGCTGGTC GGCAAGGTCA CGCCGAAGGG CGAGACCCAG
CTGACGCCGG AAGAAAAGCT GCTGCGCGCG ATCTTCGGCG AGAAGGCTTC GGACGTGAAG
GACACGTCGC TGCGCGTGCC GTCGGGCATG AGCGGCACCG TGATCGACGT CCAGGTGTTC
ACGCGTGAAG GCATCCAGCG CGACAAGCGT GCGCAACAGA TCATCGACGA CGAACTGAAG
CGCTACCGTC TCGACCTGAA CGACCAGCTG CGCATCGTGG AAGGCGACGC GTTCCAGCGT
CTCGCACGCA TGCTCGTGGG CAAGGTCGCG AACGGCGGTC CGAAGAAGCT CGCGAAGGGC
ACGAAGATCG ACCAGGCTTA CCTGGAAGAC CTCGACCACT ACCACTGGTT CGACATCCGC
CTCGCGGACG ACGAAGCAGC GGCGCAGCTC GAAGCGATCA AGAACTCGAT CGAAGAGAAG
CGTCACCAGT TCGATCTCGC GTTCGAAGAG AAGCGCAAGA AGCTCACGCA AGGCGACGAA
CTGCCGCCGG GCGTGCTGAA GATGGTCAAG GTGTACCTCG CGGTGAAGCG CCGTCTGCAG
CCTGGCGACA AGATGGCAGG CCGTCACGGT AACAAGGGTG TCGTGTCGAA GATCGTTCCG
ATCGAAGACA TGCCGTACAT GGCCGACGGC CGTCCGGCAG ACGTCGTGCT GAACCCGCTC
GGCGTGCCGT CGCGGATGAA CGTGGGTCAG GTTCTGGAAG TGCACCTCGG CTGGGCCGCG
AAGGGCCTCG GCTGGCGTAT CGGCGAAATG CTGCAGCGTC AGGCGAAGAT CGAGGAACTG
CGCACGTTCC TGACGAAGAT CTACAACGAG TCGGGCCGCC AGGAAGATCT GGAAAGCTTC
ACCGACGACG AGATCCTCGA ACTCGCGAAG AACCTGCGCG AAGGCGTGCC GTTCGCGACG
CCGGTGTTCG ACGGTGCGAC CGAGGAAGAA ATGGGCAAGA TGCTCGACCT CGCGTTCCCG
GACGACATCG CCGAACAGCT CGGCATGAAC CCGTCGAAGA ACCAGGTCCG TCTGTACGAC
GGCCGCACGG GTGAAATGTT CGAACGTCGC GTGACGCTCG GCTACATGCA CTACCTGAAG
CTGCACCACT TGGTCGACGA CAAGATGCAC GCGCGTTCGA CCGGCCCGTA CTCGCTCGTC
ACGCAGCAGC CGCTGGGTGG TAAGGCGCAG TTCGGTGGCC AGCGTTTCGG TGAAATGGAA
GTGTGGGCGC TCGAAGCGTA CGGCGCGTCC TACGTGCTGC AGGAAATGCT GACGGTGAAG
TCGGACGACG TGACCGGCCG GACGAAGGTG TACGAAAACC TCGTCAAGGG CGATCACGTG
ATCGATGCAG GCATGCCGGA ATCCTTCAAC GTGCTCGTGA AGGAAATCCG CTCGCTCGGT
ATCGATATCG ATCTCGACCG CAATTAA
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| Protein sequence | MQYSFTEKKR IRKSFAKRPI VHQVPFLLAT QLESFSTFLQ ADVPATQRKP EGLQAAFTSV
FPIVSHNGFA RLEFVSYALS SPAFNIKECQ QRGLTYCSAL RAKVRLVILD KESPNKPVVK
EVKEQEVYMG EIPLMTPTGS FVINGTERVI VSQLHRSPGV FFEHDKGKTH SSGKLLFSAR
IIPYRGSWLD FEFDPKDILY FRVDRRRKMP VTILLKAIGL TPEQILANFF VFDNFTLMDE
GAQLEFVPER LRGEVARFDI TDRDGKVIVQ KDKRINAKHI RDLEAAKTKF ISVPEDYLLG
RVLAKNVVDG DTGEVIASAN DEVTESVLEK LREAGIKDIQ TLYTNDLDQG PYISSTLRVD
ETTDKTAARI AIYRMMRPGE PPTEEAVEAL FNRLFYSEEA YDLSKVGRMK FNRRVGRDEI
VGPMTLQDDD ILATIKILVE LRNGKGEVDD IDHLGNRRVR CVGELAENQF RAGLVRVERA
VKERLGQAES ENLMPHDLIN SKPISSAIRE FFGSSQLSQF MDQTNPLSEI THKRRVSALG
PGGLTRERAG FEVRDVHPTH YGRVCPIETP EGPNIGLINS LALYAHLNEY GFLETPYRKV
VDSKVTDQID YLSAIEEGRY MIAQANAAID ENGQLIDELV SSREAGETMM VTPDRIQYMD
VAPSQIVSVA ASLIPFLEHD DANRALMGSN MQRQAVPCLR PEKPVVGTGI ERTCAVDSGT
TVQAFRGGVV DYVDAGRIVI RVNDDEAVAG EVGVDIYNLI KYTRSNQNTN INQRPIVKMG
DKVSRGDVLA DGASTDLGEL ALGQNMLIAF MPWNGYNFED SILISEKVVA DDRYTSIHIE
ELNVVARDTK LGPEEITRDI SNLAEVQLGR LDESGIVYIG AEVEAGDVLV GKVTPKGETQ
LTPEEKLLRA IFGEKASDVK DTSLRVPSGM SGTVIDVQVF TREGIQRDKR AQQIIDDELK
RYRLDLNDQL RIVEGDAFQR LARMLVGKVA NGGPKKLAKG TKIDQAYLED LDHYHWFDIR
LADDEAAAQL EAIKNSIEEK RHQFDLAFEE KRKKLTQGDE LPPGVLKMVK VYLAVKRRLQ
PGDKMAGRHG NKGVVSKIVP IEDMPYMADG RPADVVLNPL GVPSRMNVGQ VLEVHLGWAA
KGLGWRIGEM LQRQAKIEEL RTFLTKIYNE SGRQEDLESF TDDEILELAK NLREGVPFAT
PVFDGATEEE MGKMLDLAFP DDIAEQLGMN PSKNQVRLYD GRTGEMFERR VTLGYMHYLK
LHHLVDDKMH ARSTGPYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAS YVLQEMLTVK
SDDVTGRTKV YENLVKGDHV IDAGMPESFN VLVKEIRSLG IDIDLDRN
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