Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0187 |
Symbol | |
ID | 4449247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 209831 |
End bp | 210478 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639692195 |
Product | hypothetical protein |
Protein accession | YP_833834 |
Protein GI | 116688211 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000277575 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGCGGT TGACGTTTTC CCGAGTTTGC ACATTTATAA GGCCCGCACC AATGAATTTG CCGCTTCCGG AAGTTTTTCA CTCTGCCCTG CAGGGCGACC GTCTCGAAAT CATCGCGAAC ATCCTGATCG ACGAGCATTT CACGACGCTA ACCGACCTCC AAAGCGAGTT TGACGACGGC TATTCGCGCG GGACGACGCG CTTCGCCCGT CAGAAAAACC GCCTCAAGTC GGTGGCGCTG TCGGGTCAAT ACGACTGGCT GCAGCTGCTG CATGCCGGCA ATGACCTCGT TTTCACGATC GAGGGTATTC CGTGCAGGTT TGCGACTGAC GATCCGGTGA ACCCGACCAA GCCGGCGGTT CTCGATGCGA CGCCGATCCA GCAGTCTTTT TTCGATGAGG TGGAGAACGG CGAACCGTGC AAGTTCTGCT TCATTCTTGA CGGTGGCTAT GCCGAAGCGG ACGACCCGCG AGTCGTGTTT ATCGGTGAGG ATTTGATGGG GGTTGCGAAG TGTCGCTGGA CGTCGGACGG GACTAAGGCG CTTCACGCGG TTTCTGCCAA TACCCCGCCG GCGAAAGACA TCGGTAAGGC CCCGGTGGGT CCCAAGCGGA TCGACTCTGA CAAGACTGGA ACGTCTGACG CACCATGA
|
Protein sequence | MQRLTFSRVC TFIRPAPMNL PLPEVFHSAL QGDRLEIIAN ILIDEHFTTL TDLQSEFDDG YSRGTTRFAR QKNRLKSVAL SGQYDWLQLL HAGNDLVFTI EGIPCRFATD DPVNPTKPAV LDATPIQQSF FDEVENGEPC KFCFILDGGY AEADDPRVVF IGEDLMGVAK CRWTSDGTKA LHAVSANTPP AKDIGKAPVG PKRIDSDKTG TSDAP
|
| |