Gene Bcen2424_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0181 
Symbol 
ID4449241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp199905 
End bp201062 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content65% 
IMG OID639692189 
Productouter membrane protein (porin) 
Protein accessionYP_833828 
Protein GI116688205 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCA GTCTATGGAT GGCGCTTGCC ATGAGCGTCA CGGGTAGCGT CGCGTCATTC 
GCGGCGCTAG GCGATGCGCA CGCCCAAAGT AGCGTGACGC TGTACGGTGT GCTCGATACC
GGCGTGGAGT ACGTCTCGCA TGCGAATGCG GCCGGCGACA GGCTCATCCG CATGCCCGGC
ACGACCGGCG AACTGCCGTC GCGTTGGGGC CTGCGCGGTA ACGAAGATCT GGGCGGCGGC
ATGCAGGCCA CCTTCGTGCT GGAAAGCGGC TTCAATGTGC GGGGCGGCGA TCTTGGCCAG
GGAGGACGGC TGTTCGGCCG TCAGGCCTAC GTGGGCATCG CATCCGCCTA CGGCAAGCTG
ACCTTCGGGC GCCAGTACAC GATGACCTTC TGGGCCCAGA CCGACGCCGA CATTCTGGGC
CCCGACATCT ACGGTCTCGG TGCGCTCGAC GCCTACGTGC CCAACGCTCG CAGCGACAAC
ACGGTGTCGT ACCTCGGCAC ATTCAGCGGG CTCACGCTCG GCGCGACGTG GTCGTTCGGG
CGCGATTCGG CGGGGACCAG CAATTCGCCC GGACAAGGCA CGTGCGCGGG ATCGGTCGCG
GGCCATGCGA CCGAGTGCCG TCAGTGGTCG GCACTCGTCA AATACGACTC CCCATGGTTC
GGCCTTGCAG CGGCATACGA CGAGCAACGC GGTGGCACGA GCGCGGCAGC AAATTTCTTC
GACGGCGTGC CGCCACTGAC GCTGACCAAT CCCGCCGACA AGGACGCCCG GCTGCAATTC
AACGGCTACG CGAAGCTCGG CCCTGTGAAA CTTGGCGGCG GCTGGATGGG ACGGCGCGTC
GTGACCGATT CGCCCGCGCT GCCGGATGTG CGCACGAATC TCTTCTTTGT GGGCGCTGCA
TGGCAGGTGA CGCCATCCTA TATCGTAGAT GGAGAGGTCT ATCGGATAAC GAATGCCCAG
CACGACACGC GCGCCACGCT CGGAACGTTG CGCAGCACCT ATCTGCTTTC CAAGCGAACG
GCTGTTTATC TGCAGGCCGC CTATCTCGCG AACAGCGCGA AGGCGCGCTA TTCGGTCAGC
GCGGGCGGCG GCGGCACGAC CCCCGCCGCC GGCATGAACC AGACCGGCGT CATGGCGGGC
ATCCGGCAAC TTTTTTAA
 
Protein sequence
MKRSLWMALA MSVTGSVASF AALGDAHAQS SVTLYGVLDT GVEYVSHANA AGDRLIRMPG 
TTGELPSRWG LRGNEDLGGG MQATFVLESG FNVRGGDLGQ GGRLFGRQAY VGIASAYGKL
TFGRQYTMTF WAQTDADILG PDIYGLGALD AYVPNARSDN TVSYLGTFSG LTLGATWSFG
RDSAGTSNSP GQGTCAGSVA GHATECRQWS ALVKYDSPWF GLAAAYDEQR GGTSAAANFF
DGVPPLTLTN PADKDARLQF NGYAKLGPVK LGGGWMGRRV VTDSPALPDV RTNLFFVGAA
WQVTPSYIVD GEVYRITNAQ HDTRATLGTL RSTYLLSKRT AVYLQAAYLA NSAKARYSVS
AGGGGTTPAA GMNQTGVMAG IRQLF