| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0160 |
|---|
| Symbol | |
|---|
| ID | 4448225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 177438 |
|---|
| End bp | 178304 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639692168 |
|---|
| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
|---|
| Protein accession | YP_833807 |
|---|
| Protein GI | 116688184 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGG TTACTTTCCG TTCGGGCGAT ACGACGCGTC TTGGCGTTCT CGATGGCGAC
GATGTCGTGG ATCTCAACAA AGCAGACGCG TCCGTGCCCG CCGATCTGCG CGCGGCGCTC
AAAGCAGGTG TCGACCTGAA CGCGGCCGCG CGGCGCGCGA TTGCGAGCGG TGAGCACCGC
GCGCCGTATG CGTCGCTGAA GCTCGCGCCG GTCGTGCCGG AGCCGGGCAA GGTGGTGTGC
CTCGGCCACA ACTTCTACGA CCACGCGAAG GAAGGCGGCA ATCTGAAGCC GGTTTATCCG
CTGATTTTCT TCCGTGGCAC GTCGTCGCTG ATCGCACACG AAGATCCGGT GATCCGTCCG
CGCGTATCGG AAAAGCTCGA CTACGAAGCT GAACTGCTGG TCGTGATCGG CAAGCGCGCG
CGCCACGTGA AGCGCGAAAA CGCGCTCGAC TACGTCTTCG GCTACGCATG CTTCAACGAT
GTGTCGGTGC GCGACTACCA GAAGCGCACG TCGCAATGGA CGATCGGCAA GAACTTCGAC
GGCACCGGCG CATCGGGTCC GTGGCTCGTG ACCGCCGACG ACCTGCCGCC GGGCGCGGAG
GGCCTCTCGC TGCGCCTGAT CCTTAACGGC CAGGTGATGC AGCAGGCGAG CACGAGCGAC
ATGATTTGGG GCGTCGCCGA AACGATCGAA CTGCTGACCG AGTGCCTCAC GCTCGAACCG
GGCGACGTCG TCGCGATGGG CACGCCGGCC GGTGTGGGCT GGGCGCGCGA GCCGTCGGTG
TGGCTCAAGG CGGGCGACCG CGTCGAAGTG GACATCGAAC GTATCGGCCG TCTGCAAAAC
ACGGTGCAGG ACGAAGCGGG CGCATGA
|
|---|
| Protein sequence | MKLVTFRSGD TTRLGVLDGD DVVDLNKADA SVPADLRAAL KAGVDLNAAA RRAIASGEHR
APYASLKLAP VVPEPGKVVC LGHNFYDHAK EGGNLKPVYP LIFFRGTSSL IAHEDPVIRP
RVSEKLDYEA ELLVVIGKRA RHVKRENALD YVFGYACFND VSVRDYQKRT SQWTIGKNFD
GTGASGPWLV TADDLPPGAE GLSLRLILNG QVMQQASTSD MIWGVAETIE LLTECLTLEP
GDVVAMGTPA GVGWAREPSV WLKAGDRVEV DIERIGRLQN TVQDEAGA
|
|---|
| |