| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0104 |
|---|
| Symbol | |
|---|
| ID | 4450390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 105573 |
|---|
| End bp | 107114 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639692111 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_833751 |
|---|
| Protein GI | 116688128 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.679281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCA ATCCCTCTGA GATCAGCGAG CTGATCAAGA GCCGGATCCA GGGCCTTGAA
GCGAGCGCAG ACGTTCGCAA CCAGGGCACC GTGATCTCCG TGACCGACGG TATCGTGCGT
ATCCACGGCC TGTCGGACGT GATGCAGGGC GAAATGCTCG AGTTTCCGGG CAACACGTTC
GGTCTCGCGC TGAACCTCGA GCGCGACTCG GTCGGCGCGG TGATTCTCGG CGAATACGAA
CACATCTCGG AAGGCGACAT CGTCAAGACG ACGGGCCGCA TTCTCGAAGT CCCGGTCGGC
CCGGAACTCG TCGGCCGCGT GGTCGACGCG CTCGGCAACC CGATCGACGG CAAGGGCCCG
GTCAACGCGA AGCTGACCGA CGCGATCGAA AAGATCGCCC CGGGCGTGAT CTGGCGTAAG
TCGGTGTCGC AGCCGGTGCA GACGGGCATC AAGTCGATCG ACGCGATGGT GCCGATCGGC
CGTGGCCAGC GTGAGCTGAT CATCGGCGAC CGTCAGTGCG GCAAGACCGC GGTGGCGCTC
GACGCGATCA TCAACCAGAA GGGCAAGGAC CTGATCTGTA TCTACGTCGC GATCGGCCAG
AAGGCTTCGT CGATCATGAA CGTGGTTCGC AAGCTCGAAG AAACGGGCGC GATGGAATAC
ACGATCGTCG TCGCCGCTTC GGCATCGGAT TCGGCTGCCA TGCAGTACCT GGCACCGTAC
GCCGGCTGCA CGATGGGCGA ATACTTCCGC GACCGCGGCC AAGACGCGCT GATCATCTAT
GACGACTTGA CCAAGCAGGC CTGGGCATAC CGTCAGATCT CGCTGCTGCT GCGCCGCCCG
CCGGGCCGTG AAGCGTACCC GGGCGACGTG TTCTATCTGC ACTCGCGTCT GCTGGAGCGT
GCGGCTCGCG TGTCGGAAGA GTACGTCGAG AAGTTCACGA ACGGCGAAGT GAAGGGCAAG
AGCGGCTCGC TGACGGCACT GCCGGTCATC GAAACGCAGG CTGGCGACGT GACCGCGTTC
GTTCCGACGA ACGTGATCTC GATTACCGAC GGCCAGATCT TCCTGGAAAC CGACCTGTTC
AACGCAGGCA TCCGCCCGGC AATCAACGCC GGCGTGTCGG TGTCGCGCGT CGGTGGCGCC
GCTCAGACGA AGGTCGTGAA GAAGCTGTCG GGCGGTATCC GTACCGACCT CGCGCAGTAC
CGTGAACTGG CCGCATTCGC GCAGTTCGCA TCGGACCTCG ACGAAGCGAC CCGCAAGCAG
CTCGAGCGCG GCCGCCGCGT GACGGAACTG CTGAAGCAGC CGCAGTACCA GCCGCTGCAG
GTCTGGGAAC TGGCCGTGTC GCTGTACGCC GCGAACAACG GCTACCTCGA TGACCTCGAC
GTCAAGCAAG TGCTGCCGTT CGAGAAGGGC CTGCGCGACA ACCTGAAGAC CAGCCACGCT
GACCTCATCA AGCGCATCGA AGACACCAAG GATCTCTCGA AGGACGACGA AGGCGCGCTG
CGCTCGGCGA TCGAAGCCTT CAAGAAGTCC GGTGCCTATT GA
|
|---|
| Protein sequence | MQLNPSEISE LIKSRIQGLE ASADVRNQGT VISVTDGIVR IHGLSDVMQG EMLEFPGNTF
GLALNLERDS VGAVILGEYE HISEGDIVKT TGRILEVPVG PELVGRVVDA LGNPIDGKGP
VNAKLTDAIE KIAPGVIWRK SVSQPVQTGI KSIDAMVPIG RGQRELIIGD RQCGKTAVAL
DAIINQKGKD LICIYVAIGQ KASSIMNVVR KLEETGAMEY TIVVAASASD SAAMQYLAPY
AGCTMGEYFR DRGQDALIIY DDLTKQAWAY RQISLLLRRP PGREAYPGDV FYLHSRLLER
AARVSEEYVE KFTNGEVKGK SGSLTALPVI ETQAGDVTAF VPTNVISITD GQIFLETDLF
NAGIRPAINA GVSVSRVGGA AQTKVVKKLS GGIRTDLAQY RELAAFAQFA SDLDEATRKQ
LERGRRVTEL LKQPQYQPLQ VWELAVSLYA ANNGYLDDLD VKQVLPFEKG LRDNLKTSHA
DLIKRIEDTK DLSKDDEGAL RSAIEAFKKS GAY
|
|---|
| |