Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0091 |
Symbol | |
ID | 4449554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 93365 |
End bp | 95149 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639692098 |
Product | ABC transporter related |
Protein accession | YP_833738 |
Protein GI | 116688115 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACGA TGGTACGCAA CAAGACCTTC TGGCTGTTTC TCGTGGTGCT GTTCGCGCTG CCGGTGCTGC CCGGCGCGCT CCAGGTACCG GAGTACTGGA TCACGCTGCT GAACTACATC GGCCTGTATG CGATCGTCGC GATCGGGCTC GTGCTGTTGA CGGGCGTCGG CGGGATGACG AGTTTCGGGC AGGCCGCGTT CGTCGGCATT GGCGCGTATG CGACCGCGTT CCTGACGACA CGCTACGGCG TGTCGCCGTG GCTCGCGCTG ATCGTCGGCG TCGTGCTGAC GGCGCTCGTC GCGCTCGTGC TCGGCGCCGT GACGATGCGG CTGTCCGGGC ACTTCCTGCC GCTCGGTACG ATCGCGTGGG GCCTCGCGCT GTTCTACCTG TTCGGCAACC TCGAACTGCT CGGCAAGTAC GACGGGATCA ACGGGATTCC GGCGCTGAAC CTGTTCGGCA TCGTGCTCGA GAGCGGCCGC AGCCTGTATT TCCTGATCTG GGCCGTGGTG CTGGCCGCGA TCGTGTCGGT GCAGAACCTG CTGAACAGCC GCCCGGGCCG CGCGATCCGC GCGCTGCGCG GCGGCGGCGT GATGGCCGAG GCGATGGGCG TGAACACCGC GTGGATGCGC GTCGTGATCT TCGTCTACGC GGCCGTGCTC GCGGCGGTAT CGGGCTTCCT GTACGCGCAC CTGCAACGCG CGGTGAACCC GACGCCGTTC GGCCTGAACC ACGGGATCGA ATTCCTGTTC ATGGCCGTGG TGGGCGGCGT GTCGCACGTG TGGGGCGCGG TGCTCGGCGC CGCGATCCTG ACCGTCCTGC AGGACTACCT GCAGACGCTG CTGCCGAAGC TGCTCGGCTC GGAAGGCAAC TTCGAGATCA TCGTGTTCGG CGTGCTGATG GTGCTGCTGC TGCAGTACGC GCGCCAGGGC GTATGGCCGT TCGTCGCGAG GCTGTTCCCG CGCGGACCGC GCGCGCATGT GCCGGAGCAG GCCGACCCGC TGCCGCAGCG CGCGAAACCC GTGGCCGGCG AGCCTCTGCT GGTCGTCGAC AACGCACGCA AGCAGTTCGG CGGGCTGGTG GCCGTCAACG ACGTCAGCTT CGACGTGAAA GCGGGGCAGA TCATCGGGCT GATCGGCCCG AACGGCGCGG GCAAGTCGAC CACGTTCAAC CTCGTGACCG GGGTGCTGAG GCCCACTGGC GGTGCGATCA CGTTCCGTGG CGAGCGCATC GACGGGCTGA CGTCGCGTCA GATCGTGCGC CGCGGCATCG GTCGCACGTT CCAGCACGTG AAGCTGTTGC CGGCGATGAC GGTGCTCGAG AACGTCGCGA TCGGCGCCCA CCTGCGTGGT CATACCGGCG TGTGGCGCAG CATCGCGCGG CTCAATGCGC ACGAGGAAGC GCAGTTGCTG GCCGAAGCCG CGCGCCAGAT CCGCCGCGTC GGGCTCGAGA AGCACATGTA CGACGAAGCA GGCAGTCTCG CGCTCGGCCA GCAGCGGATT CTCGAAATCG CGCGGGCGCT GTGCTGCGAT CCGACGCTGC TGTTGCTCGA CGAACCGGCC GCGGGGCTGC GTTACCAGGA GAAACAGCAA CTCGCCGACC TGCTGCGGCG GCTGAAGGCC GAAGGCATGA GCGTGTTGCT CGTGGAACAT GACATGGATT TCGTGATGAA TCTCACCGAC CGGCTGGTGG TGATGGAATT CGGCACGCGG ATCGCGGAAG GGCTGCCGCA GGATGTGCAG CAGGACCCGG CCGTGCTGGA AGCGTATCTG GGCGGGGTGG AGTGA
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Protein sequence | MKTMVRNKTF WLFLVVLFAL PVLPGALQVP EYWITLLNYI GLYAIVAIGL VLLTGVGGMT SFGQAAFVGI GAYATAFLTT RYGVSPWLAL IVGVVLTALV ALVLGAVTMR LSGHFLPLGT IAWGLALFYL FGNLELLGKY DGINGIPALN LFGIVLESGR SLYFLIWAVV LAAIVSVQNL LNSRPGRAIR ALRGGGVMAE AMGVNTAWMR VVIFVYAAVL AAVSGFLYAH LQRAVNPTPF GLNHGIEFLF MAVVGGVSHV WGAVLGAAIL TVLQDYLQTL LPKLLGSEGN FEIIVFGVLM VLLLQYARQG VWPFVARLFP RGPRAHVPEQ ADPLPQRAKP VAGEPLLVVD NARKQFGGLV AVNDVSFDVK AGQIIGLIGP NGAGKSTTFN LVTGVLRPTG GAITFRGERI DGLTSRQIVR RGIGRTFQHV KLLPAMTVLE NVAIGAHLRG HTGVWRSIAR LNAHEEAQLL AEAARQIRRV GLEKHMYDEA GSLALGQQRI LEIARALCCD PTLLLLDEPA AGLRYQEKQQ LADLLRRLKA EGMSVLLVEH DMDFVMNLTD RLVVMEFGTR IAEGLPQDVQ QDPAVLEAYL GGVE
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