Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0087 |
Symbol | |
ID | 4449550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 88907 |
End bp | 89884 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639692094 |
Product | inner-membrane translocator |
Protein accession | YP_833734 |
Protein GI | 116688111 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.410791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAGAA AAGTGCTCTA CGGCGTGCTG CTCGCCGCAC TGCTCGCCGC GCCGTTCATC GGCGCGTATC CGGTGTTCGT GATGAAGGTG CTCGCGTTCG CGCTGTTCGC GGCGGCGTTC AACCTGCTGA TCGGCTATAC GGGGCTGCTG TCGTTCGGCC ATGCGATGTT CCTCGCGACG GCCGGCTATG CGACCGGCTA TTCGATGCAG ACGCTCGGTT TCACGCCGGA GCTCGGCGTG CTGGCCGGCA CCGTCGCCGC GACGGTGCTC GGGCTCGTCG TCGGGCTGTT CGCGATCCGC CGGCAGGGCA TCTACTTCGC GATGATCACG CTCGCGTTCG CGCAGATGGT CTACTTCATC TATCTGCAGG CGCCGTTCAC GCACGGCGAG GACGGCCTGC AGGGCGTGCC GCGCGGCCGC CTGTTCGGGC TGCTCGACCT GTCGAACGAC GTCGCGCTGT ACTACGTCGT GCTGGCGGTG GTCGTGGCCG CGTGCGCGTT CATCGTGCGG GTCGTCCATT CGCCGTTCGG CCAGGTGCTC GTCGCCATCA AGGAGAACGA AGCGCGCGCG ATCTCGCTCG GCTACGACAC CGACCGCTTC AAGCTGCTCG CGTTCATCCT GTCGGCCGGG CTCGCGGGGC TGGCCGGCTC GCTGAAGGTG CTGGTGCTCG GCTTCGAGAC GCTATCGGAC GCGTACTGGA CGATGTCGGG CCTCGTCGTA CTGATGACGC TCGTCGGCGG GATGGGCACG CTGTTCGGGC CGCTGCTCGG CGCCGCGCTG ATCGTCGCGC TGGAAGACCG GCTCGGCGAC ATCGGCGAAT GGCTCGCGTC GACGACGGGC GTCGCGTGGT TCCATTCGCT CGGCGAATCG GCGACGATCG TCACCGGGCT GATCTTCATC GCATGCGTGC TGGCGTTCCG GCGCGGCATC GTCGGCGAGA TGGTCGCGCG GATCAAGCCG CTCAGGGCCT CGTCGTGA
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Protein sequence | MQRKVLYGVL LAALLAAPFI GAYPVFVMKV LAFALFAAAF NLLIGYTGLL SFGHAMFLAT AGYATGYSMQ TLGFTPELGV LAGTVAATVL GLVVGLFAIR RQGIYFAMIT LAFAQMVYFI YLQAPFTHGE DGLQGVPRGR LFGLLDLSND VALYYVVLAV VVAACAFIVR VVHSPFGQVL VAIKENEARA ISLGYDTDRF KLLAFILSAG LAGLAGSLKV LVLGFETLSD AYWTMSGLVV LMTLVGGMGT LFGPLLGAAL IVALEDRLGD IGEWLASTTG VAWFHSLGES ATIVTGLIFI ACVLAFRRGI VGEMVARIKP LRASS
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