Gene Bcen2424_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0085 
Symbol 
ID4449548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp86695 
End bp87894 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content65% 
IMG OID639692092 
Productbranched chain amino acid ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_833732 
Protein GI116688109 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.782241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGA AGACCCTCGC ACAGGCCTGT CTCGCGCTCG CGACCGCCGC GCTCACCGCC 
GGCGCCGCCC ACGCGGCGGA TACCGTGAAG ATCGGCTTCA TCACCGACAT GTCGGGGCTT
TACGCGGATA TCGACGGGCA GGGCGGTCTC GAGGCGATCC GCATGGCGGT CGCGGACTTC
GGCGGCAAGG TGCTCGGCAA GCCGATCGAG GTCGTCTATG CCGACCACCA GAACAAGGCC
GACATCGCCG CGTCGAAGGC GCGCGAATGG ATGGACCGCG GCGGCCTCGA TCTGCTGGTC
GGCGGCACGA ACTCGGCCAC CGCGCTGTCG ATGAACCAGG TCGCGGCCGA GAAGAAGAAG
GTCTACATCA ACATCGGCGC GGGCGCCGAC ACGCTGACCA ACGAGCAGTG CACGCCGTAC
ACGGTCCACT ACGCGTACGA CACGATGGCG CTCGCGAAGG GCACCGGCTC GGCGGTGGTG
AAGCAGGGCG GCAAGAGCTG GTTCTTCCTG ACGGCCGACT ACGCGTTCGG CAAGGCGCTC
GAGAAGAACA CGTCGGACGT CGTGAAGGCG AACGGCGGCC AGGTGCTCGG CGCGGTGCGT
CACCCGCTGT CCGCGTCGGA TTTCTCGTCG TTCCTGTTGC AGGCGCAATC GTCGAAGGCG
CAGATCCTCG GCCTCGCGAA CGCGGGCGGC GACACGATCA ACTCGATCAA GGCCGCGAAG
GAATTCGGCA TCACGAAGAC GATGAAGCTC GCCGCGCTGC TGATGTTCAT CGACGACGTG
CACAGCCTCG GCCTCGAGAC GACGCAGGGC CTCGTGCTGA CCGACAGCTG GTACTGGAAC
CGCGACGCGG CGTCGCGCCA GTGGGCGCAG CGCTACTTCG GCAAGATGAA GAAGATGCCG
TCGAGCCTGC AGGCGGCCGA CTACTCGTCG GTTACGACCT ACCTGAAGGC CGTGCAGGCC
GCCGGGACGA CCGACTCCGA CAAGGTGATG GCCGAGCTGA AGAAGATCAA GATCAGCGAC
TTCTACGCGA AGGGCTACAT CCGTCAGGAC GGCAGCATGA TCCACGACAT GTACCTGATG
GAAGTGAAGA AGCCGTCCGA ATCGAAGGAG CCGTGGGACT ACTACAAGGT GCTCGCGACG
ATTCCGGGCG ACCAGGCGTT CGGCACCAAG CAGGAAACGC GCTGCGCGCT GTGGAAGTAG
 
Protein sequence
MKMKTLAQAC LALATAALTA GAAHAADTVK IGFITDMSGL YADIDGQGGL EAIRMAVADF 
GGKVLGKPIE VVYADHQNKA DIAASKAREW MDRGGLDLLV GGTNSATALS MNQVAAEKKK
VYINIGAGAD TLTNEQCTPY TVHYAYDTMA LAKGTGSAVV KQGGKSWFFL TADYAFGKAL
EKNTSDVVKA NGGQVLGAVR HPLSASDFSS FLLQAQSSKA QILGLANAGG DTINSIKAAK
EFGITKTMKL AALLMFIDDV HSLGLETTQG LVLTDSWYWN RDAASRQWAQ RYFGKMKKMP
SSLQAADYSS VTTYLKAVQA AGTTDSDKVM AELKKIKISD FYAKGYIRQD GSMIHDMYLM
EVKKPSESKE PWDYYKVLAT IPGDQAFGTK QETRCALWK