| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0081 |
|---|
| Symbol | |
|---|
| ID | 4449404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 81787 |
|---|
| End bp | 82725 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639692088 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_833728 |
|---|
| Protein GI | 116688105 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACT GCGTTATAAG CCACGCTCAT ATCACGACGA TGGATCTCAC CCTGCTCCGC
GCGTTCGCGA CGGTCGCGCG CGAAGGCAAC CTGACGCGCG CCGCCGCGCA ACTGCACGTC
ACGCAGCCGG CCGTCAGCCT GCAGATCAAG CATCTGCAGG AAACGCTCGG CGTCGCGCTG
TTCACGCGCA CGTCGCGCGG GCTCGCGCTC ACGCGCGACG GACAGACGCT GCTGCCGCAT
GCGGAACGCG CGCTCGCCGC GGCGGCCGAC GTGCAGCGCG CCGCTGCCGC GCTGCGGCAC
GAAGTGCGCG GCCGGCTGCG GATCGGCACG ATCCTCGATC CGGGCTTCCT GCGGCTCGGC
GGCTTCCTGC GCGCGCTGGT CGAGACCCAT CCGCAGATCG AGACCGCGCT GCGGCACGGG
ATGTCGGGCT GGGTGATCGA ACAGGTGCGC GCGCAGGCGC TCGACGTCGG CTACTACATC
GGCCGCCCCG AAGAGGACTC GCCGCGCGAC GACGCGCTGT TCCACACCGT CACGCTCACG
CGCTTCGAAT ATCGCGTCCT GGCGCCGGCC GGCTGGAAGG AGCGCGTGCA GCGCGCGCAC
GACTGGCGCG CGCTCGCCGC GCTGCCGTGG ATCTGGACGC CGCCGGCGTC CGCGCACCAT
CGGCTGCTGT CGCGACGTTT CGCGGCGGCC GGCGCGCAGC CGGTGAAGGT CGCCGAGGTC
GACCAGGAGC AGTCGATGCT CGATCTCGTC AAATCGGGGA TCGGCTTGAC GCTCGCGCGC
GATTCGACCG CGCTGGCCGA AGCGCACGCG CATGCGCTGA CGATCGTCGA ACCCGTGACG
GTGCCGACCG AACTGACGTT CGTGACGCTC GCCGCGCGGC GCGACGAGCC GGCGATCGCG
GCCGCGCTGC GGCTGATCGA AGCGCAGTGG GCGATATGA
|
|---|
| Protein sequence | MLNCVISHAH ITTMDLTLLR AFATVAREGN LTRAAAQLHV TQPAVSLQIK HLQETLGVAL
FTRTSRGLAL TRDGQTLLPH AERALAAAAD VQRAAAALRH EVRGRLRIGT ILDPGFLRLG
GFLRALVETH PQIETALRHG MSGWVIEQVR AQALDVGYYI GRPEEDSPRD DALFHTVTLT
RFEYRVLAPA GWKERVQRAH DWRALAALPW IWTPPASAHH RLLSRRFAAA GAQPVKVAEV
DQEQSMLDLV KSGIGLTLAR DSTALAEAHA HALTIVEPVT VPTELTFVTL AARRDEPAIA
AALRLIEAQW AI
|
|---|
| |