Gene Bcen2424_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0060 
Symbol 
ID4448767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp59062 
End bp60279 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content68% 
IMG OID639692067 
Productgeneral secretion pathway protein F 
Protein accessionYP_833707 
Protein GI116688084 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID[TIGR02120] general secretion pathway protein F 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.211909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGCAT TCCGTTTCGA AGCAATCGAT GCGGCGGGAC GCGCGCAGAA AGGCGTGATC 
GATGCCGACA GTGCGCGCGC CGCGCGCGGC CAGCTGCGCA CGCAGGGGCT CACGCCGCTC
GTCGTCGAGC CGGCCGCCAG CGCGACGCGC GGCGCGCGTT CGCAGCGGCT CGCGTTCGGC
CGCAAGCTGT CTCAGCGCGA ACAGGCGATC CTCACGCGCC AGCTCGCGAG CCTGCTGATC
GCGGGACTGC CGCTCGACGA GGCGCTCGGC GTGCTGACCG AGCAGGCCGA GCGCGACTAC
ATCCGCGAAC TGATGGCCGC GATCCGCGCG GAAGTGCTCG GCGGCCATTC GCTCGCGAAC
GCGCTCGGCC AGCATCCGCG CGATTTTCCG GAGATCTACC GCGCACTCGT TGCTGCGGGC
GAGCACACCG GCAAGCTCGG CATCGTGCTG TCGCGCCTGG CCGACTACAT CGAGCAGAGC
AATGCGCTCA AGCAGAAGAT CCTGCTGGCG TTCACGTATC CGGGCATCGT CACGCTGATC
GCGTTCGGCA TCGTCACGTT CCTGCTGAGC TACGTCGTGC CGCAGGTCGT CAACGTGTTC
GCGAGCACGA AGCAGCAGCT GCCGATCCTC ACGGTCGTGA TGATGGCGCT GTCGGAATTC
GTGCGGCACT GGTGGTGGGC GATCCTGATC GCGGTCGCGC TCATCGTGTG GTTCGTGAAG
GCGACGCTGT CGCGCGCCGG GCCCCGGCTC GCGTTCGATC GCTGGGTGCT GACCGCGCCG
CTCGCGGGCA AGCTCGTGCG CGGCTACAAC ACGGTGCGCT TCGCGAGCAC GCTCGGCATT
CTCACCGCGG CCGGCGTGCC GATCCTGCGC GCGTTGCAGG CGGCCGGCGA GACGCTGTCG
AACCGCGCGA TGCGCGCGAA CATCGACGAT GCGATCGTGC GCGTGCGCGA AGGCTCGGCG
CTGTCGCGCG CGCTGAACAA CGTGAAGACG TTTCCGCCGG TGCTCGTGCA CCTGATTCGT
TCGGGCGAGG CGACGGGCGA CGTGACGACG ATGCTGGATC GCGCGGCCGA AGGCGAAGCG
CGCGAGCTGG AGCGCCGCAC GATGTTCCTG ACGAGCCTGC TGGAGCCGCT GCTGATCCTC
GCGATGGGTG GCATCGTGCT CGTGATCGTG CTGGCCGTGA TGCTGCCGAT CATCGAGCTG
AACAACATGG TGCAGTGA
 
Protein sequence
MPAFRFEAID AAGRAQKGVI DADSARAARG QLRTQGLTPL VVEPAASATR GARSQRLAFG 
RKLSQREQAI LTRQLASLLI AGLPLDEALG VLTEQAERDY IRELMAAIRA EVLGGHSLAN
ALGQHPRDFP EIYRALVAAG EHTGKLGIVL SRLADYIEQS NALKQKILLA FTYPGIVTLI
AFGIVTFLLS YVVPQVVNVF ASTKQQLPIL TVVMMALSEF VRHWWWAILI AVALIVWFVK
ATLSRAGPRL AFDRWVLTAP LAGKLVRGYN TVRFASTLGI LTAAGVPILR ALQAAGETLS
NRAMRANIDD AIVRVREGSA LSRALNNVKT FPPVLVHLIR SGEATGDVTT MLDRAAEGEA
RELERRTMFL TSLLEPLLIL AMGGIVLVIV LAVMLPIIEL NNMVQ