| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0055 |
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| Symbol | |
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| ID | 4448762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 56297 |
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| End bp | 56995 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639692062 |
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| Product | general secretion pathway protein |
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| Protein accession | YP_833702 |
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| Protein GI | 116688079 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.163391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAG CCGTCCGCTC TGACGCGCCG ATGCGACGCC CGTCCGCCCT CTCGTCCCGC
GCTGCCCGCG GCTTCACGCT GATCGAGCTG ATGATCGCGA TCGCGATCAT CGCGGTGGTG
GCGATCCTCG CGTGGCGCGG GCTCGACCAG ATCATGCGCG GTCGCGACAA GGTCGCCGCC
GCGATGGAGG ACGAGCGCGT GTTCGCGCAG ATGTTCGACC AGATGCGCAT CGACGCGCGG
CTCGCCGCGA CCGACGACGA GGCCGGCCAG CCGGCGATCG GCGTCGCCGG CAATACGCTG
CAGATCGTGC GCGAACTCGA CGTGCCGGGC GTCGCGCCGC GGCTGCAGGT GGTCCGCTAC
CGGATCGCCG GCGGGCGCGT CGTGCGCTAC GCATCGCCGC CGATCGACGA CACGAACCGG
CTGCGCACCG TGCTGAAGGA CAGCAGCGTC GAAGGCTGGA GCTGGGTCGC GCTGATGGGC
GGCGTCGGCG CGATCGACGC GAAGCTGTAC GTGCCGCGCG TGGGCTGGAC CACCAACCTG
CAGACGGCCG ACGACGCGCT CGCGCAGAAC AACGATGCGC TGAAGGTGCC GCAGATCGGC
AACGCGCCGC CGGCGCGCGC GGTGACCGGG CTGCAGGTCA GCATCGGCGC GACGTCGCTG
CGCGTGCCGA TCACGCGCAT CTTCCTCGTC GGGGAATGA
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| Protein sequence | MKPAVRSDAP MRRPSALSSR AARGFTLIEL MIAIAIIAVV AILAWRGLDQ IMRGRDKVAA
AMEDERVFAQ MFDQMRIDAR LAATDDEAGQ PAIGVAGNTL QIVRELDVPG VAPRLQVVRY
RIAGGRVVRY ASPPIDDTNR LRTVLKDSSV EGWSWVALMG GVGAIDAKLY VPRVGWTTNL
QTADDALAQN NDALKVPQIG NAPPARAVTG LQVSIGATSL RVPITRIFLV GE
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