| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0047 |
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| Symbol | |
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| ID | 4448516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 47883 |
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| End bp | 49445 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639692054 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_833694 |
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| Protein GI | 116688071 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.843987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCA CCACGGCATC CGCCCCCTCC CCCGCTGCCG AACCGGCGCC GCTGACCGGC
GGCGCGCTCG CACTGCTGAC CGTCGGGCTC GCGCTCGGCA CCTTCATGGA AGTGCTCGAC
ACGTCGATCG CGAACGTCGC GGTGCCGACC ATCTCGGGCA GCCTCGGCGT CGCGACGAGC
GAGGGCACGT GGGTGATTTC GTCGTACTCG GTCGCGTCCG CGATCGCGGT GCCGCTGACC
GGCTGGCTCG CGCGCCGGGT CGGCGAGGTG CGCCTGTTCA CGCTGTCGGT GCTCGCGTTC
ACGATCGCGT CGGCGCTGTG CGGCTTCGCG ACCAACTTCG AGACGCTGAT CGCGTTCCGG
CTGCTGCAGG GCCTCGTGTC CGGGCCGATG GTGCCGCTGT CGCAGACGAT TCTGATGCGC
AGCTACCCAC CCGCGAAACG CGGGCTCGCG CTCGGGCTAT GGGCGATGAC GGTGATCGTC
GCGCCGATCT TCGGCCCGCT GCTGGGCGGC TGGATCAGCG ACAACTACAC GTGGCCGTGG
ATCTTCTACA TCAACCTGCC GATCGGCGTG TTCTCGGCGA CCTGCGCGTA TTTCCTGCTG
CGCGGCCGCG AGACGAAGAC GTCGAAGCAG CGGATCGACG CGATCGGCCT CGCGCTGCTC
GTGATCGGCG TGTCGTGCCT GCAGATGATG CTCGACCTCG GCAAGGACCG CGACTGGTTC
AACTCGACCT TCATCGTCGC GCTCGCGCTG ATCGCGGTCG TGTCGCTCGC GTTCATGCTC
GTGTGGGAGG CGACCGAGAA GGAGCCGGTG GTCGACCTGT CGCTCTTCAA GGACCGCAAC
TTCGCGCTCG GCGCGCTGAT CATCTCGTTC GGCTTCATGG CGTTCTTCGG CTCGGTCGTG
ATCTTCCCGC TGTGGCTGCA GACGGTGATG GGCTACACGG CCGGCAAGGC CGGCCTCGCG
ACCGCGCCGG TCGGGCTGCT CGCGCTGGTG CTGTCGCCGC TGATCGGCCG CAACATGCAC
CGGCTCGACC TGCGGATGGT CGCGAGCTTC GCGTTCATCG TGTTCGCGGG CGTGTCGCTG
TGGAACGCGA CGTTTACGCT CGACGTGCCG TTCAACCACG TGATCCTGCC GCGGCTCGTG
CAGGGCATCG GCGTCGCGTG CTTCTTCGTG CCGATGACGA CGATCACGCT GTCGAGCATC
TCCGACGAGC GGCTCGCGAG TGCGTCGGGG CTGTCGAACT TCCTGCGCAC GCTGTCCGGC
GCGATCGGCA CCGCGGCCAG CTCGACGTTC TGGGAGAACG ACGCGATCTA CCATCATGCG
CGGCTGTCGG AATCGGTGAG CATCTACGCG CAGAACACGA CCGACTACCA GGGCGCGCTC
GCGCAGCTCG GCATCGTCGG CCAGACGGCC AATGCGCAAC TCAACCAGCT CGTCACGCAG
CAAGGCTTCA TGATGGCGAC CAACGACTTC TTCCATCTGT CGGCGGGCGT GTTCGTCGCG
CTCGCGGCGC TCGTGTGGAT CACGAAGCCG AAGAAGGGCG CAGGGCCCGC GATGGGGCAT
TGA
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| Protein sequence | MSATTASAPS PAAEPAPLTG GALALLTVGL ALGTFMEVLD TSIANVAVPT ISGSLGVATS
EGTWVISSYS VASAIAVPLT GWLARRVGEV RLFTLSVLAF TIASALCGFA TNFETLIAFR
LLQGLVSGPM VPLSQTILMR SYPPAKRGLA LGLWAMTVIV APIFGPLLGG WISDNYTWPW
IFYINLPIGV FSATCAYFLL RGRETKTSKQ RIDAIGLALL VIGVSCLQMM LDLGKDRDWF
NSTFIVALAL IAVVSLAFML VWEATEKEPV VDLSLFKDRN FALGALIISF GFMAFFGSVV
IFPLWLQTVM GYTAGKAGLA TAPVGLLALV LSPLIGRNMH RLDLRMVASF AFIVFAGVSL
WNATFTLDVP FNHVILPRLV QGIGVACFFV PMTTITLSSI SDERLASASG LSNFLRTLSG
AIGTAASSTF WENDAIYHHA RLSESVSIYA QNTTDYQGAL AQLGIVGQTA NAQLNQLVTQ
QGFMMATNDF FHLSAGVFVA LAALVWITKP KKGAGPAMGH
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