Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0019 |
Symbol | |
ID | 4448814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 22304 |
End bp | 23185 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639692026 |
Product | RNA polymerase sigma factor SigJ |
Protein accession | YP_833666 |
Protein GI | 116688043 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAACC TCGACCCGGC CAGCCGCCGC GCCGAAGAAC AAGCCGACGC GGCGGCGAGC TTCGATCCGC TGCGTCGCAC GCTGATCCGC GTCGCGTACC GGATGCTCGG TTCCGTCGCG GATGCCGAGG ACATGGTGCA GGAGGCGTTC ATCCGCTGGA TGGACGTCGA CCGTACCGAG ATACGCGTGC CCGAGGCGTT CCTGCGCCGC ATGGTGATGC GCATGTGCCT CGACCAGCTG AAATCCGCGC GGCACCAGCG CGAGACCTAT ATCGGCCCGT GGCTGCCCGA GCCGGTCGTC GAGGAAGACG AACCGGACGA CGTCACGCTG CCGCTGCTGC TCGCGCTCGA ACGGCTCTCG CCGCTCGAAC GCGCGGCGTT CCTGCTGCAC GACGTGTTCG GCCTCGAATT CGACGAAGTC GCCACGACGA TCCAGCGCGA CCCGGCCGCG TGCCGGCAGC TCGCCGCACG AGCCCGCACG CACGTGCGCG ACGCGCGACC GCGTTTTCAT GTCGAGAAGC AGCGCGGGAT CGAACTGGCC GAAGCGTTTT TCGCGGCGTC ACGCAGCGGC GACATGCGCG CACTCGGCGC GATGCTCGCC GAGGACGTGA GCCTGCATTC CGACGGCGGC GGCAAGCGCA CGGCGGCCGG CAAGCCGGTA TTCGGCTTCG AGCTTGTGAT GCGGGTGCAT GCGTACCTGG CCGAGCTGTT CGCGACGCAT GCGTCGAAGC TCGTGCGGGC CGGGTTCATC AACGGGCTGC CGGGTTTCAT CACGCTCGAA GCCGACGGCG AGCTGCAGAC GACTGCGCTC GAGATCGACG ACGGCAAGAT CGTCGCGATC TATGTCGTGC GGAATCCTGA CAAATTGAAG CATCTGCATT GA
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Protein sequence | MPNLDPASRR AEEQADAAAS FDPLRRTLIR VAYRMLGSVA DAEDMVQEAF IRWMDVDRTE IRVPEAFLRR MVMRMCLDQL KSARHQRETY IGPWLPEPVV EEDEPDDVTL PLLLALERLS PLERAAFLLH DVFGLEFDEV ATTIQRDPAA CRQLAARART HVRDARPRFH VEKQRGIELA EAFFAASRSG DMRALGAMLA EDVSLHSDGG GKRTAAGKPV FGFELVMRVH AYLAELFATH ASKLVRAGFI NGLPGFITLE ADGELQTTAL EIDDGKIVAI YVVRNPDKLK HLH
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