Gene Bcen2424_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0019 
Symbol 
ID4448814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp22304 
End bp23185 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content67% 
IMG OID639692026 
ProductRNA polymerase sigma factor SigJ 
Protein accessionYP_833666 
Protein GI116688043 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAACC TCGACCCGGC CAGCCGCCGC GCCGAAGAAC AAGCCGACGC GGCGGCGAGC 
TTCGATCCGC TGCGTCGCAC GCTGATCCGC GTCGCGTACC GGATGCTCGG TTCCGTCGCG
GATGCCGAGG ACATGGTGCA GGAGGCGTTC ATCCGCTGGA TGGACGTCGA CCGTACCGAG
ATACGCGTGC CCGAGGCGTT CCTGCGCCGC ATGGTGATGC GCATGTGCCT CGACCAGCTG
AAATCCGCGC GGCACCAGCG CGAGACCTAT ATCGGCCCGT GGCTGCCCGA GCCGGTCGTC
GAGGAAGACG AACCGGACGA CGTCACGCTG CCGCTGCTGC TCGCGCTCGA ACGGCTCTCG
CCGCTCGAAC GCGCGGCGTT CCTGCTGCAC GACGTGTTCG GCCTCGAATT CGACGAAGTC
GCCACGACGA TCCAGCGCGA CCCGGCCGCG TGCCGGCAGC TCGCCGCACG AGCCCGCACG
CACGTGCGCG ACGCGCGACC GCGTTTTCAT GTCGAGAAGC AGCGCGGGAT CGAACTGGCC
GAAGCGTTTT TCGCGGCGTC ACGCAGCGGC GACATGCGCG CACTCGGCGC GATGCTCGCC
GAGGACGTGA GCCTGCATTC CGACGGCGGC GGCAAGCGCA CGGCGGCCGG CAAGCCGGTA
TTCGGCTTCG AGCTTGTGAT GCGGGTGCAT GCGTACCTGG CCGAGCTGTT CGCGACGCAT
GCGTCGAAGC TCGTGCGGGC CGGGTTCATC AACGGGCTGC CGGGTTTCAT CACGCTCGAA
GCCGACGGCG AGCTGCAGAC GACTGCGCTC GAGATCGACG ACGGCAAGAT CGTCGCGATC
TATGTCGTGC GGAATCCTGA CAAATTGAAG CATCTGCATT GA
 
Protein sequence
MPNLDPASRR AEEQADAAAS FDPLRRTLIR VAYRMLGSVA DAEDMVQEAF IRWMDVDRTE 
IRVPEAFLRR MVMRMCLDQL KSARHQRETY IGPWLPEPVV EEDEPDDVTL PLLLALERLS
PLERAAFLLH DVFGLEFDEV ATTIQRDPAA CRQLAARART HVRDARPRFH VEKQRGIELA
EAFFAASRSG DMRALGAMLA EDVSLHSDGG GKRTAAGKPV FGFELVMRVH AYLAELFATH
ASKLVRAGFI NGLPGFITLE ADGELQTTAL EIDDGKIVAI YVVRNPDKLK HLH