Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Arth_4004 |
Symbol | |
ID | 4447267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Arthrobacter sp. FB24 |
Kingdom | Bacteria |
Replicon accession | NC_008541 |
Strand | - |
Start bp | 4519928 |
End bp | 4521901 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639691835 |
Product | PTS system, mannitol-specific IIC subunit |
Protein accession | YP_833479 |
Protein GI | 116672546 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2213] Phosphotransferase system, mannitol-specific IIBC component [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
TIGRFAM ID | [TIGR00851] PTS system, mannitol-specific IIC component |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.852778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAACAG AGACAGTTGC AAAACCCCGC ACCAGCCTGC GGGTTGGCGT CCAGAAATTC GGGACGTTCC TGTCCGGAAT GATCATGCCC AACATCGGCG CTTTCATCGC CTGGGGCATC ATCACGGCCT TCTTCATTCC GGCGGGCTTT ACTCCCAATG AGGAACTGGC CAAGCTCGTT GGCCCGATGA TCACCTTCCT GCTTCCGCTC CTGATCGGCT ACACCGGCGG TCGCATGGTC CACGGCGTCC GTGGCGGCGT TGTCGGCGCG GCCGCAACTA TGGGCGTGAT CGTCGGTACG GACATCCCCA TGTTCATCGG CGCCATGATC ATGGGCCCGC TGACCGCATG GATCATGAAG AAGCTGGACA AGATCTGGGA AGGCCGGGTC AAGCCGGGCT TCGAGATGCT GATCGACAAC TTCACCGCAG GCATCGTGGC AGCAGCCATG GCCATCGTGG GCATGCTGGT GATCGGCCCG GTGGTGAAGG CCTTCAGCAA CGGCGCCAGT TCCGTCGTCG AATTCCTGGT CAACAACGGC TTGCTGCCGT TCACCAGCAT CTTCATCGAG CCGGCCAAGG TACTGTTCCT GAACAACGCC GTGAACCATG GCATCCTGAC GCCGCTGGGT ACGGAACAGG CACTGCAAAA CGGAAAATCC ATCCTGTTCC TGCTCGAAGC CAACCCGGGT CCCGGCGTGG GCATCCTGCT TGCGTACATG ATCTTCGGCA AGGGCCTGGC CAAGGCGTCA GCCCCCGGCG CCGCCCTGAT CCAGTTTGTT GGCGGTATCC ACGAAATCTA CTTCCCGTTC GTACTGATGA AGCCCATCAT CATCCTGGCC GCAATCGGAG GCGGGATGAC GGGCATCTTC ACCCTGGTGC TCACCGGCGC AGGCCTGCGC TCCCCGGCCG CCCCGGGCAG CATCATCGCC GTCTTCGCCG CGACCGCCAG CGACAGCTAC TTCGGAGTGG CGCTGTCCGT GCTGCTCGCC GCCACGGTGT CCTTCCTGAT CGCTTCGGTG ATCCTGAAGT CCAGCAAGAC CCCCGTGGGC GAAACCGAGG AGGACAGCCT GAGCGCCGCC ACCTCCCGGA TGGAGTCCAT GAAGGGCAAA AAGAGCTCCA TCTCCTCCAC CCTGACCGGT GCGGGAGCAA CGACGGCCGT TATGGCTGGC CCCATCAAGA ACATCGTGTT TGCCTGCGAC GCCGGCATGG GCTCAAGCGC CATGGGCGCT TCGGTTCTGC GGAACAAGAT CAAGGCGGCC GGCTTCCCCG ACGTCAAGGT CACCAACTCC GCCATTGCGA ACCTGAGCGA CACCTACGAT GTGGTCATCA CCCACCAGGA CCTGACCGAG CGGGCCAAAC CCGCCACGGG CAGCGCCGTG CACGTATCCG TGGACAACTT CATGAACAGC CCGCGCTATG ACGAGATCGT GGAGCTGGTC AAGAGCAGCA ACACCGAAGG AACGGCTGGC GCCGCTGCTC CCGCTGCCGC TGCGGCGCCA GTGGCGACTG CAGCCCCGTC AGCTGCCGAA GCCGCAACGC CGTCGGACAT CCTGGTGGCT GACAGCGTTG TGCTCAATGG CACGGCCACC ACCCGCGACG CCGCAATCGA CGAAGCGGGC CGGCTGCTGC TGGACCGCGG CGCCGTGGAC AGTGGCTACA TCGATGCCAT GCACGAACGC GAGGAATCCG TGTCCACGTA CATGGGGAGC TTCCTGGCCA TTCCGCACGG CACCAACGCC GCCAAGGACC ACATCATGAA GTCCGCCGTG TCCGTGATCC GTTACCCGAA CGGCATCGAC TGGAACGGCA AGGAGGTCAA GTTTGTGGTG GGCGTGGCCG GCATCAACAA CGAGCACCTG CAGATCCTGT CCTCCATCGC GAAGGTGTTC ACCAACAAGG CCCAGGTGGC ACAGCTCGAG GCGGCCACCA CGGTTGACGA AGTGCTGGAA CTGTTCGGAA AGGTCAACGC ATAG
|
Protein sequence | MATETVAKPR TSLRVGVQKF GTFLSGMIMP NIGAFIAWGI ITAFFIPAGF TPNEELAKLV GPMITFLLPL LIGYTGGRMV HGVRGGVVGA AATMGVIVGT DIPMFIGAMI MGPLTAWIMK KLDKIWEGRV KPGFEMLIDN FTAGIVAAAM AIVGMLVIGP VVKAFSNGAS SVVEFLVNNG LLPFTSIFIE PAKVLFLNNA VNHGILTPLG TEQALQNGKS ILFLLEANPG PGVGILLAYM IFGKGLAKAS APGAALIQFV GGIHEIYFPF VLMKPIIILA AIGGGMTGIF TLVLTGAGLR SPAAPGSIIA VFAATASDSY FGVALSVLLA ATVSFLIASV ILKSSKTPVG ETEEDSLSAA TSRMESMKGK KSSISSTLTG AGATTAVMAG PIKNIVFACD AGMGSSAMGA SVLRNKIKAA GFPDVKVTNS AIANLSDTYD VVITHQDLTE RAKPATGSAV HVSVDNFMNS PRYDEIVELV KSSNTEGTAG AAAPAAAAAP VATAAPSAAE AATPSDILVA DSVVLNGTAT TRDAAIDEAG RLLLDRGAVD SGYIDAMHER EESVSTYMGS FLAIPHGTNA AKDHIMKSAV SVIRYPNGID WNGKEVKFVV GVAGINNEHL QILSSIAKVF TNKAQVAQLE AATTVDEVLE LFGKVNA
|
| |