Gene Arth_3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagArth_3954 
Symbol 
ID4447772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameArthrobacter sp. FB24 
KingdomBacteria 
Replicon accessionNC_008541 
Strand
Start bp4468114 
End bp4468890 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID639691785 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_833429 
Protein GI116672496 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0540156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA CCATCCAGCG CACCGCCGTC CTCACGGGGG CCACTTCGGA CCGCGGCATC 
GGCATCACCA CCGCACGCCG CTACGCCAAC CAGGGCTGGG CGGTGGTGAT CCTGGACCTC
GACGGCGAGA AATCCGCCAA GGTCGCCGCC GAAATCGGCA ACGAGTTCAA CGTCCCCGCC
TTCGGCCACG AGATCGACGT CGCCAATGAG GGCTCCGTCA ACGCCGCCTA TGCAGCCGTC
GCCGCAGAAG TCGCCGCCGG CAACCTTCCC CCCGTGGGCG CGCTGGCCAA CATTGCCGGC
ATCACCTCGC CGGTGCCGTT CCTGGAAACC ACCCTGGAGC TCTGGCACAA GGTGATGGAC
GTCAACGCCA CCGGAACCTA CCTGGTCACC AAGGCCTTCC TGCCGGACAT GATTGCCAGC
GGCTGGGGCC GGATTGTGAA CATGTCCTCC GTCTCCGCGC AGCGCGGCGG CGGCGTCTTC
GGCAAGGTCC CCTACTCCGC CGCCAAGGCA GCCATCCTGG GCTTCACCAA GGCGCTCGCC
CGCGAAATCG GCGCCACCGG CGTGACCGTC AACGCGATCA CCCCGGGCGC CGTGGACACC
AACATCCGCG TGGGCAGCAC CGAGGAGCAG GAGGCCGCCA TCAACGCCGG CATCCCCCTG
GGCCGCAACG CCACCACCGA GGAAATCGCC GCCGTCATCA CATTCCTGTC CTCCGAGGAA
TCGGCCTACC TCACGGGAAC CACCATCGAC ATCAACGGCG GAAGCCACAT CCACTAG
 
Protein sequence
MSTTIQRTAV LTGATSDRGI GITTARRYAN QGWAVVILDL DGEKSAKVAA EIGNEFNVPA 
FGHEIDVANE GSVNAAYAAV AAEVAAGNLP PVGALANIAG ITSPVPFLET TLELWHKVMD
VNATGTYLVT KAFLPDMIAS GWGRIVNMSS VSAQRGGGVF GKVPYSAAKA AILGFTKALA
REIGATGVTV NAITPGAVDT NIRVGSTEEQ EAAINAGIPL GRNATTEEIA AVITFLSSEE
SAYLTGTTID INGGSHIH