| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_2927 |
|---|
| Symbol | |
|---|
| ID | 4444414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | + |
|---|
| Start bp | 3296691 |
|---|
| End bp | 3297569 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639690750 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_832406 |
|---|
| Protein GI | 116671473 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0944491 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCTA TAGCTTGGGG GATCATCGCC CTCACCGTTA TACCTGCCTC GTACCTCGCC
TGGTCACTGA TTGTGGCGGA CCGCAAATCC CGACTCGTCA TTCAGGGCAA CCTCAGCAAA
GGCCTCGAAG CCAGCGGGGC AGCAACCGCA CCCCAAAACA TGGATTTGGA GCGGATGGCT
CGAAGGCTCA CGCCGAGCGG ATACGAAGCC AAGCTCGACA GGCTGCTCGC CCTTGCAGGC
CGCCCCTCGT CCATGCCTCT CCCGCGCCTG CTGGTGGCCA AGCCCGCCCT GGCCCTCGTT
GTGGCGGTCC TCATGATGCT AATGCTCAGC CGCAATGGCA GTGCACAAAT GATTCTCCTG
GCGGTCTTCG CAACTGGACT AGCATATTTC GTTCCCGACC TTCTCATCTA CAGCCGCGGG
CAGGAACGCC AGAAGAAGAT CCAGCTAGAA CTGCCCAACA CTCTGGACCA GATGCTGATC
GCAGTTGAGG CCGGCCTCGG CTTCGAGTCC GCAATGGCCC GGGCGGGCCA GAACGGCAAG
GGCCCGCTCG CCGAAGAACT CATCCGGACG CTGCAGGACA TGCAAGTTGG CCGCTCGCGC
AGGGATTCCT ATCTCGCCTT GGCCGAGCGC AGCAATGTGC AGGACCTGAG AACCTTCGTC
CGGGCAGTGG TTCAGGCGGA CACATACGGC ATTGCCATCG CCAAGGTCCT CAAGGCCCAG
GCGAAGGAAA TGCGGGTAAA ACGTCGTCAA CGAGCCGAAC AGAAGGCCAT GAAGCTGCCA
GTGCTCGTTC TGTTCCCGCT ACTGCTCTTC ATATTTCCGG TCATCTTCAT CGTAATTCTG
GGACCAGCGG TCATTAACAT CATCGAGGCC TTCTCGTAG
|
|---|
| Protein sequence | MQPIAWGIIA LTVIPASYLA WSLIVADRKS RLVIQGNLSK GLEASGAATA PQNMDLERMA
RRLTPSGYEA KLDRLLALAG RPSSMPLPRL LVAKPALALV VAVLMMLMLS RNGSAQMILL
AVFATGLAYF VPDLLIYSRG QERQKKIQLE LPNTLDQMLI AVEAGLGFES AMARAGQNGK
GPLAEELIRT LQDMQVGRSR RDSYLALAER SNVQDLRTFV RAVVQADTYG IAIAKVLKAQ
AKEMRVKRRQ RAEQKAMKLP VLVLFPLLLF IFPVIFIVIL GPAVINIIEA FS
|
|---|
| |