Gene Arth_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagArth_2889 
Symbol 
ID4444446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameArthrobacter sp. FB24 
KingdomBacteria 
Replicon accessionNC_008541 
Strand
Start bp3254467 
End bp3255297 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content66% 
IMG OID639690712 
Productshikimate 5-dehydrogenase 
Protein accessionYP_832368 
Protein GI116671435 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0619869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAATTC TGAATAAAGA CATGACCCTG TGCATCTCGC TCTCGGCCCG GCCGAGCAAC 
AACGGGACCC GCTTCCACAA CCATCTTTAC GAGCAGCTGG GCCTGAACTG GATCTACAAG
GCGTTCGCGC CAACGGACCT GGCCCAAGCC ATCGCCGGCG TCAGGGGCCT GGGCATCCGG
GGCTGCGCTG TGTCCATGCC GTACAAGGAA GACGTCATCG CGCTGGTCGA CGTCATGGAC
CCCTCCGCCA AGGCCATCGA TTCCGTTAAC ACGATCGTGA ATGACGGAGG CCGGCTCACG
GCGTACAACA CCGACTACAC GGCCATCGAG CAGCTGCTGC AGCGTAACGC CGTCCCCACC
AACTATTCAG TGCTGCTCAA GGGTTCCGGG GGCATGGCCA AAGCCACCGC CGCCGCCCTC
CGTGACGCAG GCTTCACGGA CGTCACCATC GTGGCCCGGA ACGAGGCATC CGGTAAGCCG
CTGGCGGACC TCTACGGATT CAAGTGGAGG CCCGAGCTCC CGGCGGCGGA CGCCGGCGGC
ACGGCGGACA TGATCATCAA CGTCACGCCC GTCGGCATGG CGGGAGGGCC GGATGCTGAC
TCGCTGTCCT TCCCGCAGGA GGCCGTGGAC GCCGCGAAAG TGGTGTTCGA CGTCGTTGCG
CTGCCCGCCG AGACGCCGCT CATCAAGGCG GCCCGCGCTG CCGGCAAGAC CGTGATCACC
GGAGCGGAAG TGGCCACCAT CCAGGCCCTG GAGCAGTTTG TGCTGTACAC CGGTGTCCGG
CCCACGGACG AGCAGGTCCG GGCGGCGGAA GAGTTCATGC GGGCCCAGTA G
 
Protein sequence
MPILNKDMTL CISLSARPSN NGTRFHNHLY EQLGLNWIYK AFAPTDLAQA IAGVRGLGIR 
GCAVSMPYKE DVIALVDVMD PSAKAIDSVN TIVNDGGRLT AYNTDYTAIE QLLQRNAVPT
NYSVLLKGSG GMAKATAAAL RDAGFTDVTI VARNEASGKP LADLYGFKWR PELPAADAGG
TADMIINVTP VGMAGGPDAD SLSFPQEAVD AAKVVFDVVA LPAETPLIKA ARAAGKTVIT
GAEVATIQAL EQFVLYTGVR PTDEQVRAAE EFMRAQ