Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Arth_2889 |
Symbol | |
ID | 4444446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Arthrobacter sp. FB24 |
Kingdom | Bacteria |
Replicon accession | NC_008541 |
Strand | - |
Start bp | 3254467 |
End bp | 3255297 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639690712 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_832368 |
Protein GI | 116671435 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0619869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCAATTC TGAATAAAGA CATGACCCTG TGCATCTCGC TCTCGGCCCG GCCGAGCAAC AACGGGACCC GCTTCCACAA CCATCTTTAC GAGCAGCTGG GCCTGAACTG GATCTACAAG GCGTTCGCGC CAACGGACCT GGCCCAAGCC ATCGCCGGCG TCAGGGGCCT GGGCATCCGG GGCTGCGCTG TGTCCATGCC GTACAAGGAA GACGTCATCG CGCTGGTCGA CGTCATGGAC CCCTCCGCCA AGGCCATCGA TTCCGTTAAC ACGATCGTGA ATGACGGAGG CCGGCTCACG GCGTACAACA CCGACTACAC GGCCATCGAG CAGCTGCTGC AGCGTAACGC CGTCCCCACC AACTATTCAG TGCTGCTCAA GGGTTCCGGG GGCATGGCCA AAGCCACCGC CGCCGCCCTC CGTGACGCAG GCTTCACGGA CGTCACCATC GTGGCCCGGA ACGAGGCATC CGGTAAGCCG CTGGCGGACC TCTACGGATT CAAGTGGAGG CCCGAGCTCC CGGCGGCGGA CGCCGGCGGC ACGGCGGACA TGATCATCAA CGTCACGCCC GTCGGCATGG CGGGAGGGCC GGATGCTGAC TCGCTGTCCT TCCCGCAGGA GGCCGTGGAC GCCGCGAAAG TGGTGTTCGA CGTCGTTGCG CTGCCCGCCG AGACGCCGCT CATCAAGGCG GCCCGCGCTG CCGGCAAGAC CGTGATCACC GGAGCGGAAG TGGCCACCAT CCAGGCCCTG GAGCAGTTTG TGCTGTACAC CGGTGTCCGG CCCACGGACG AGCAGGTCCG GGCGGCGGAA GAGTTCATGC GGGCCCAGTA G
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Protein sequence | MPILNKDMTL CISLSARPSN NGTRFHNHLY EQLGLNWIYK AFAPTDLAQA IAGVRGLGIR GCAVSMPYKE DVIALVDVMD PSAKAIDSVN TIVNDGGRLT AYNTDYTAIE QLLQRNAVPT NYSVLLKGSG GMAKATAAAL RDAGFTDVTI VARNEASGKP LADLYGFKWR PELPAADAGG TADMIINVTP VGMAGGPDAD SLSFPQEAVD AAKVVFDVVA LPAETPLIKA ARAAGKTVIT GAEVATIQAL EQFVLYTGVR PTDEQVRAAE EFMRAQ
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