| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_2673 |
|---|
| Symbol | |
|---|
| ID | 4444761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | - |
|---|
| Start bp | 2994243 |
|---|
| End bp | 2995466 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639690493 |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_832152 |
|---|
| Protein GI | 116671219 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCTG TTCGAATCGT GGAGGACGAG GTTCGCGAGC TGATCCGGCG GCGCGGTCTG
GACCCTTTGC GGCAGGCCGG CGAGGTCAGG CGCCTGGTCG AGGCAGCCGT CAGCGACTAT
GACGAACGCG CATTGATGGG GCCGCTTCCG CCGATCGGCC CGCTGGAGTC CGCCCGTCGG
CATGTCTACG ACGCCGTGGC CGGTTTCGGT GCGTTGCAGC CTCTGTTGGA TGACCCTACC
ATCGAAGAAA TTTGGCTCAA CGCACCCAAC GAAATCTACG TGGCACGCAA CGGCGAATCC
GAACTCACCT CGCTTAGTCT CTCGGACCAG CAGGTGCGGG ACCTGGTGGA ACGCATGCTG
AAAAGCTCGG GGCGCCGGCT TGATATGTCT TCGCCGTTTG TGGATGCGGC CCTCCCGGAC
GGATCCCGGC TGCACGTCGT CATTCCTGAT GTGACGCGGC GACACTGGGC GGTCAACATC
CGCAAGTTCG TGGTCAAGGC GAGCCGGCTC GAACATCTCG TGGAGCTGGG CACCCTGACT
CCGCAGGCGG CCCGGTTCCT TGGCGCTGCA GTGGCCAGCG GACTCAATAT CCTGGTCTCC
GGGGCGACGC AGGCCGGGAA GACCACCATG CTGAACTGCC TGGCTGCCAG CATCGGTGCC
CGGGAGCGCG TCATTACGGT CGAGGAGATC TTCGAACTGC AGTTTCCGTT GCGCGATGTC
GTCGGATTGC AGTGCAGGCA GCCCAATCTG GAGGGGGAAG GCGAGATTCC GCTGCGAAGG
CTCGTCAAGG AAGCCCTCAG GATGCGGCCG GACCGCCTGG TGGTGGGAGA GGTCCGTGAG
GCGGAAAGCC TGGACATGCT GATCGCGCTT AATTCGGGGC TTCCCGGCAT GTGCACAGTC
CACGCCAACT CGGCACATGA CGCCGTCACC AAGCTGTGCA CCCTTCCGCT CCTGGCCGGC
GACAACATCT CAAGTGCTTT TGTGGTGCCG ACCGTCGCTT CGTGCATTGA CCTGGTGGTC
CACTGCAGCC GACAGGGGGA CGGCCGGCGC CAGGTGACGG AAATTCTGTC ACTCGGACGG
CGCGTGGAAA ACGGCATCAT CGAATCGTCC ATGGTCTTTG CGATGACCGA CGGCCAGCTG
CAACCCAAAG CAAACTCCAT GCCTGCCGTC GAGAAGTTTG CCGGTGCAGG ATTTGACGTT
GCAGCCCTGC TGGAGGTCCG CTAA
|
|---|
| Protein sequence | MDAVRIVEDE VRELIRRRGL DPLRQAGEVR RLVEAAVSDY DERALMGPLP PIGPLESARR
HVYDAVAGFG ALQPLLDDPT IEEIWLNAPN EIYVARNGES ELTSLSLSDQ QVRDLVERML
KSSGRRLDMS SPFVDAALPD GSRLHVVIPD VTRRHWAVNI RKFVVKASRL EHLVELGTLT
PQAARFLGAA VASGLNILVS GATQAGKTTM LNCLAASIGA RERVITVEEI FELQFPLRDV
VGLQCRQPNL EGEGEIPLRR LVKEALRMRP DRLVVGEVRE AESLDMLIAL NSGLPGMCTV
HANSAHDAVT KLCTLPLLAG DNISSAFVVP TVASCIDLVV HCSRQGDGRR QVTEILSLGR
RVENGIIESS MVFAMTDGQL QPKANSMPAV EKFAGAGFDV AALLEVR
|
|---|
| |