| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_2645 |
|---|
| Symbol | kgd |
|---|
| ID | 4444766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | + |
|---|
| Start bp | 2967051 |
|---|
| End bp | 2970884 |
|---|
| Gene Length | 3834 bp |
|---|
| Protein Length | 1277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639690465 |
|---|
| Product | alpha-ketoglutarate decarboxylase |
|---|
| Protein accession | YP_832124 |
|---|
| Protein GI | 116671191 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.178892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCAGAGC AGCCTAGCCA CCGTCTACCA GAGGAATTTG GCGGAAACGA GTGGCTCGTT
GACGAACTGT ACGAGCGTTA CCAGCAGGAC AAGAACACGG TAGATGCCAA GTGGTGGCCC
CTGTTCGAAT CCTTCGACGC CGGTGACAGC GCGTCTTCCA ACGGGGCCTC GGGTGCAGCG
GCTCCCGCAG ATCCCGCAAC CCGCGAACTT CCAGTTGTAG CTCCCGCTCC GGCAGCACCG
GCATCGTCGC CGGCGAAACC TGCAGCGGCC GCAGCTGCGC AGCCGGCATC CCCCCAGACC
CCTTCCGCCC AGCCGCAGGC AGCTCCGGCT GCAGCACCGG CGAAGAAAGC ACCTGCCACT
GTTGCCCGCG ACGGCGCAAA GAAGCCCGAA ACCGCAGGCA CCCCGCCCAT CCCCGCCCAG
CTGCCCAAGA ACATCAAGGC CCCCACCGCT CCGGAAGAGG ACGTCGTCTC CGTCCTCCGC
GGACCGGCGA AGGCCATCGC TTCCAACATG GTCACCAGCC TGGAAGTTCC CACGGCCACC
AGCGTCCGCG CCATTCCGGC CAAGCTGCTG ATCGACAACC GCGTGGTCAT CAACTCCAAC
CTGGCCCGCG CCCGCGGCGG CAAGGTTTCC TTCACGCACC TGATCGGCTA TGCCGTCATC
CGGGCCCTGT CCCAGTTCCC CTCCATGAAC GTCTATTACG ACGAAGTGGA CGGCAAGCCC
GTTGCGGTCC AGCCCGCACA CGTGAACTTC GGCATCGCCA TCGACATGCC CAAGCCGGAC
GGCACCCGCC TGCTGATGGT GCCGAACATC AAGAAGGCGG AGACCCTCAA CTTCTCCGAG
TTCTGGCACA CCTACGAGGA CCTGATCAAG CGCGCCCGCA ATGGCAAGCT GACCGCCGAT
GACCACTCCG GCACCACGGT CTCCCTCACT AACCCGGGCG GCATCGGCAC TGTGCACTCC
GTGCCGCGCC TCTCCAAGGG CCAGGCCGCC ATTATCGGTG TCGGCGCGCT GGATTACCCG
GCCGAGTTCC AAGGGGCCAG CGAGAAGATC ATCGCGCAAA ACGCCATCAG CAAGGTCCTT
ACGCTGACGT CCACGTATGA CCACCGCGTG ATCCAGGGCG CCGGCAGCGG CGAGTTCCTC
AAGCTCGTGC ACCAGCTGCT GCTGGGTGCC CAGAACTTCT ACGACGAAAT CTTCGAGTCC
CTGCGTATCC CGTACGAGCC TGTGCGCTGG AGCCCGGACC TGCAGGTCGA CCCGGCGGAC
CAGATCAACA AGGTCGCCCG GATCCAGCAG CTGATCCACT CCTACCGCGT GCGCGGGCAC
CTCATGGCGG ACACGGATCC GCTGGAATAC GTACAGCGCA AGCACCCGGA CCTCGACGTC
CTCACCTACG GCCTGACCCT GTGGGACCTC GACCGCGAGT GGCCCACCGG CGGTTTCGGC
GGCAAGCCCA TGCTTGCGTT CCGCGACATC CTCGGCGTCC TCCGTGACGC CTACTGCCGC
ACCACCGGCA TTGAGTACAT GCACATCCAG GACCCGGCCG AGCGCAAGTG GTTCCAGGAC
CAGCTGGAGC ACGAGTACTC CAAGCCGAGC CGCGAAGAGC AGCTGCGCAT CGTGTCCAAG
CTCAATGCCG CGGAAGCCTT CGAAACCTTC CTGCAGACCA AGTTCGTGGG GCAGAAGAGG
TTCTCGCTGG AGGGCGGCGA ATCACTGATC CCGCTGCTGG ACGCCATCAT CTCCGACGCG
GCCGACGACG ATCTCGACGA AGTTGCGATC GGCATGGCCC ACCGCGGCCG CCTGAACGTG
CTCACCAACA TCGCCGGGAA GACCTACGCA CAGGTCTTCC GTGAATTCGA GGGAACCCAG
GACCCGCGCT CCGTGCAGGG CTCCGGCGAC GTGAAGTACC ACCTCGGCAC CGAGGGCACC
TTCACCTCGG ACAGCGGCAA GGAGACCAAG GTCTACCTCG CAGCCAACCC CTCGCACCTC
GAGGCCGTGG ACTCGGTCCT TGAAGGCATC GTCCGCGCCA AGCAGGACCG CCTGGACCAG
GGCGAGGCGT TCCCCGTGCT GCCCATCATG GTGCACGGCG ACGCGGCGTT CGCCGGCCAG
GGCGTGGTGG CGGAAACGCT CAACCTCTCC CAGCTCCGCG GCTACCGCAC CGGCGGTACC
ATCCACGTCG TGGTCAACAA CCAGGTTGGC TTTACCACCG CTCCGTCCTC GTCGCGTTCC
TCCACCTACT CCACGGACGT CGCCAAGATG ATCCAGGCTC CGGTGTTCCA CGTGAACGGC
GACGACCCGG AGGCCGTGGT CCGCATCGGC CAGCTCGCCT ACGAGTTCCG CCAGCGCTTC
CACAAGGACG TTGTCATCGA CATGGTCTGC TACCGGCGCC GCGGGCACAA CGAGGGCGAT
GACCCCTCGA TGACCCAGCC GCTGATGTAC AACCTGATCG AAGCCAAGCG CTCGGTCCGC
AAGCTGTACA CCGAGTCCTT GATCGGCCGC GGGGACATCA CCGAGGAAGA AGCCGAGCAA
CTGCTCCGCG ACTACCAGGA ACGGCTGGAG CGGGTCTTCG CCGAGACCCA TGCAGCACAG
ACTTCACCGA TCCCGATCAT CACGGCGGAT TCCGCCGCAG TGTCCGACAT CGAACGGCCC
AGCGCCCAGC AGTCGGACTT CGGCATCAAC GCACCCGCGT CCACTGCGAT CTCCGCAGAG
ACGTTGGCGC GCATCGGCAA GGCCCACATC GAGATCCCCG AGGGCTTCAC GGTCCACGCC
AAGCTCAAGC AGTTGCTGGA GAAGCGCGAA CAGATGTCCC GCGAAGGCGG CATCGACTGG
GGCTTCGGCG AGATCGCAGC CTTTGGCTCG CTCATCATGG AAGGCGTTCC GGTCCGGCTC
GCAGGCCAGG ATTCCCGCCG CGGAACCTTC GTGCAGCGCC ACGCAGTGTT CCACGACCGC
GCCAACGGCA ATGAATGGCT GCCCTTGGGC AACCTCTCCG ATGACCAGGC CAAGCTGTGG
ATCTACGACT CCCTGCTGTC CGAATACGCT GCGATGGGCT TCGAATACGG CTACTCCGTG
GAGCGCCCCG ATGCCCTGGT GCTGTGGGAA GCGCAGTTCG GCGACTTCGT CAACGGCGCG
CAGACCATCA TCGATGAGTT CATCTCCTCG GCCGAGCAAA AGTGGGGCCA GCGTTCCTCC
CTGGTGCTCA TGCTGCCCCA CGGCTACGAA GGCCAGGGTC CGGACCACTC GTCCGCACGG
ATCGAGCGCT TCCTGCAGCT GTGTGCCGAA GAGAACATGA TCGTGGCCAA CCCCACGACG
TCGGCTTCGC ACTTCCACTT GCTGCGCCGC CAGGCGTACA GCCGCCCGCG GAAGCCGCTC
ATCATCTTCA CGCCCAAGCA GTTGCTCCGC CTGAAGGCTG CTGCCTCTTC GGTGGAGGAC
TTCACCACCG GTGCGTTCAA GCCCGTCATC GGCGAGCACG AACAGCTGCA GGCAGACGCC
GTCGAGCGTG TGCTGCTGGT GTCCGGCCGC CTGTACTACG ATCTCCTGTC CACGCGACAG
AAGACCGGCG ACAAGACGAC GGCGATCGTC CGCGTCGAGC AGCTCTACCC GCTGCCCGCC
GCTGAAATCG CTGCCGAACT CGCCAAGTAC CCCAACGCCG AAGTGGTGTG GGCACAGGAC
GAACCGGCCA ACCAGGGCCC GTGGCCGTTC ATGGGCCTGA ACCTTCCCGA GGCACTGGAC
CGCCGGGTGA AGCTGGTTTC CCGTCCGGCT TCGGCATCCA CGGCAGCCGG TTCCATGAAG
CGGCACGCTG CGGAGCAGGA TACCCTCCTC AAGCAGGCGT TTGCTCGGAA GTAG
|
|---|
| Protein sequence | MPEQPSHRLP EEFGGNEWLV DELYERYQQD KNTVDAKWWP LFESFDAGDS ASSNGASGAA
APADPATREL PVVAPAPAAP ASSPAKPAAA AAAQPASPQT PSAQPQAAPA AAPAKKAPAT
VARDGAKKPE TAGTPPIPAQ LPKNIKAPTA PEEDVVSVLR GPAKAIASNM VTSLEVPTAT
SVRAIPAKLL IDNRVVINSN LARARGGKVS FTHLIGYAVI RALSQFPSMN VYYDEVDGKP
VAVQPAHVNF GIAIDMPKPD GTRLLMVPNI KKAETLNFSE FWHTYEDLIK RARNGKLTAD
DHSGTTVSLT NPGGIGTVHS VPRLSKGQAA IIGVGALDYP AEFQGASEKI IAQNAISKVL
TLTSTYDHRV IQGAGSGEFL KLVHQLLLGA QNFYDEIFES LRIPYEPVRW SPDLQVDPAD
QINKVARIQQ LIHSYRVRGH LMADTDPLEY VQRKHPDLDV LTYGLTLWDL DREWPTGGFG
GKPMLAFRDI LGVLRDAYCR TTGIEYMHIQ DPAERKWFQD QLEHEYSKPS REEQLRIVSK
LNAAEAFETF LQTKFVGQKR FSLEGGESLI PLLDAIISDA ADDDLDEVAI GMAHRGRLNV
LTNIAGKTYA QVFREFEGTQ DPRSVQGSGD VKYHLGTEGT FTSDSGKETK VYLAANPSHL
EAVDSVLEGI VRAKQDRLDQ GEAFPVLPIM VHGDAAFAGQ GVVAETLNLS QLRGYRTGGT
IHVVVNNQVG FTTAPSSSRS STYSTDVAKM IQAPVFHVNG DDPEAVVRIG QLAYEFRQRF
HKDVVIDMVC YRRRGHNEGD DPSMTQPLMY NLIEAKRSVR KLYTESLIGR GDITEEEAEQ
LLRDYQERLE RVFAETHAAQ TSPIPIITAD SAAVSDIERP SAQQSDFGIN APASTAISAE
TLARIGKAHI EIPEGFTVHA KLKQLLEKRE QMSREGGIDW GFGEIAAFGS LIMEGVPVRL
AGQDSRRGTF VQRHAVFHDR ANGNEWLPLG NLSDDQAKLW IYDSLLSEYA AMGFEYGYSV
ERPDALVLWE AQFGDFVNGA QTIIDEFISS AEQKWGQRSS LVLMLPHGYE GQGPDHSSAR
IERFLQLCAE ENMIVANPTT SASHFHLLRR QAYSRPRKPL IIFTPKQLLR LKAAASSVED
FTTGAFKPVI GEHEQLQADA VERVLLVSGR LYYDLLSTRQ KTGDKTTAIV RVEQLYPLPA
AEIAAELAKY PNAEVVWAQD EPANQGPWPF MGLNLPEALD RRVKLVSRPA SASTAAGSMK
RHAAEQDTLL KQAFARK
|
|---|
| |