Gene Arth_2481 details

Gene Information

• Locus tag: Arth_2481
• Symbol: rimM
• ID: 4445070
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Arthrobacter sp. FB24
• Kingdom: Bacteria
• Replicon accession: NC_008541
• Strand: -
• Start bp: 2776833
• End bp: 2777426
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639690296
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_831960
• Protein GI: 116671027
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00367621
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCTTC AGGTGGCACG AATCGGCAAA CCGCACGGCA TCCGCGGCGA AGTGACCGTC 
CAGGTCCTGA CCGACGCGCC GGAGGACCGA TTCATTCCGG GCACCCGGTT CGTGGTTGAA 
CCCGCGTCGG CGGGGCCGCT CACCGTTGAC AGTGCCCGCT GGAACAAGGA CATCCTGCTG 
CTGGGCTTCG AAGGCATCGA GACGCGCAAC CAGGCCGAAG CCCTGCGCGG CGCCAAGCTG 
TTCATCGAGA CTGAAGAACT CGAGGAGGAA GACGACGAAG GCTGGTACGA GCACGAGCTC 
GTCGGCCTCG ACGTCCGCGT TGGCGATGCC GTCGTAGGCA CGATTTCCGG TCTCCGCACC 
CTTCCGGTCC AGGACCTTAT CGTGGTGGAG TCGCCGGACG GCAAGGAAAT CCTGATTCCC 
TTCGTCGAGG AAATCGTGCC TGAGGTCAAT GTCGGAGAGA AGTACATCCT GGTCACTCCG 
CCGCCCGGCC TCTTCGAAAT CAACGTTGAA GATTCCGGCG AAACGTCGGA CGCCGGCGAA 
TCCGGGCCGG GCGAGGCGGA GCCGGGCAAG GCTGAGGCCG GAGACAACGC CTAA 

 

Protein sequence

MQLQVARIGK PHGIRGEVTV QVLTDAPEDR FIPGTRFVVE PASAGPLTVD SARWNKDILL 
LGFEGIETRN QAEALRGAKL FIETEELEEE DDEGWYEHEL VGLDVRVGDA VVGTISGLRT 
LPVQDLIVVE SPDGKEILIP FVEEIVPEVN VGEKYILVTP PPGLFEINVE DSGETSDAGE 
SGPGEAEPGK AEAGDNA