| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_2142 |
|---|
| Symbol | |
|---|
| ID | 4445219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | - |
|---|
| Start bp | 2413960 |
|---|
| End bp | 2416074 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639689950 |
|---|
| Product | acyl-CoA oxidase domain-containing protein |
|---|
| Protein accession | YP_831622 |
|---|
| Protein GI | 116670689 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.315023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACG TAGTTGACCG CGCCGCCAGC CAGGCGCGCC GCCCCGCCGG GAGCGCACAC
CACCATGCCG ACGCGGCGCC CGCCGTCGAC GTCGCTGCGC TGGGCGAGCA GCTCCTGGGC
AAGTGGGCCC ACATCCGCCG GCATTCGCGC GACCTTTCAG GCCGTCCCGA ACTGCACAAG
ACCGAAGGCC TCACCCACAC CGAGCACCGG AAGCGCACGT TCGGCCAGCT CCAGTACCTG
GTGGAGAACG GTGCCGTTCA TCGCGCTTTC CCCGAATCAC TGGGTGGTTC GGATGATCAC
GGCGGGAACA TCGCCGGGTT CGAGGAACTC GTCACAGCCG ATCCGTCGCT GCAGATCAAG
GCTGGCGTCC AGTGGGGGCT GTTCGGTTCG GCTGTGATGC ACCTGGGCAC CGAGGAGCAC
CATGCCAAGT GGCTGCCCGG CATTATGAAC ATGGACATTC CCGGCTGTTT CGCGATGACG
GAAACCGGGC ACGGCTCCGA CGTGGCCAGC ATTGCCACCA CGGCGACCTT TGACCCGGCC
ACGCAGGAAT TCGTCATCAA CACGCCCTTC CGTGCCGCCT GGAAGGACTA CATAGGAAAT
GCCGCCATCG ACGGTCTCGG CGCCGTGGTG TTCGCCCAGC TGGTGACCCG CGGCGTGAAC
CACGGGGTCC ACGCGTTCTA CGTGGACCTG CGGGACCCGA AGACCAAGGA GTTCCTGCCG
GGCATCGGTG GAGAGGACGA CGGCGTCAAG GGCGGGCTGA ACGGCATCGA CAACGGCCGG
CTGCACTTCA GCAACGTCCG CGTACCGCGG GCCAACCTGC TCAACCGGTA CGGCAACGTT
GACGCCGACG GGGCCTACAC CTCTCCCATT GCCAGCCCGG GCCGTCGCTT CTTCACCATG
CTGGGCACCC TCGTCCAGGG CCGCGTCTCC CTGGACGGTG CCGCGGTGGC TGCCAGCAAG
CTGGCCCTCA AGACCGCCAT CCAGTACGCC ACTGAGCGCC GCCAGTTCAA CGCCTCCTCG
CACACTGACG AAGAAGTGCT GCTCGACTAC CAGCGTCATC AGCGGCGGCT GTTCACCCGG
CTCGCCACCA CTTATGCCGC AGGCTTCGCC CACGAACAGT TGCTGCAGAA ATTCGACGAC
GTCTTCTCGG GTGCACACGA CACCGACGAG GACCGCCAGG ACCTCGAGAC ACTGGCCGCC
GCACTCAAGC CGCTCAGCAC GTGGCACGCC CTGGATACTT TGCAGGAGTG CCGCGAGGCC
TGCGGCGGCG CAGGGTTCCT GATCGAGAAC CGTTTCGCTT CCCTCCGGGC GGACTTGGAC
GTGTATGTCA CGTTTGAAGG CGACAACACC GTGCTCCTCC AGCTGGTGGC CAAGCGGCTC
CTCGCGGACT ACGCGAAGGA ATTCCGCAAC GTGGACGTCG GGGTGCTGGC ACGCTACGTA
GTGAGCCAGG CGGCCGGCGC CGCGGTACAC CGGACCGGGC TTCGCCAGGT CGCGCAGTTC
ATGGCCGACA CGGGCTCGGT GCAGAAGGCG GCCATTGCAC TCCGGGACGA GGACACCCAG
CGGCTGCTGC TGACGGACAG GGTGCAGACC ATGGTTGCCG AGGCCGGAGC AGCACTCAAG
GGAACCAACA AGCTGCCGCA GCAGAAGGCC GCTGCGGCTT TCAACCAGCA CCAGCACGAA
TTGATTGAGG CGGCGCAGGC CCACGCGGAG CTTCTGCAGT GGGAAGCCTT CACGGAAGCC
CTGGCCGACG TGAAGGACCC GGGCACCAAG CGGGTGCTGA CCTGGCTCCG GGATCTGTTC
GGACTCTCGC TCATCGAGAA GAACCTGTCC TGGTACCTCA TGAACGGTCG CCTGTCGATG
CAGCGGGCGC GCACTGTGGG CGACTACATC AACCGCCTCC TGGTCAAGAT CCGCCCGCAT
GCCCTGGACC TGGTGGATGC CTTCGGCTAC GGCCCGGAGC ATCTCCGCGC GGCAATTGCC
ACCGGAGCAG AAAAGACACG CCAGGACGAG GCCCGTGCGT TCTTCAGGAC CCAGCGCGCC
GACGGCAAGG CCCCGGTTGA CGAAAAGGTC CTCCTGGCCC GGAAGGCCCG TGACACGAAG
GCTCCGCGCC GCTAA
|
|---|
| Protein sequence | MTDVVDRAAS QARRPAGSAH HHADAAPAVD VAALGEQLLG KWAHIRRHSR DLSGRPELHK
TEGLTHTEHR KRTFGQLQYL VENGAVHRAF PESLGGSDDH GGNIAGFEEL VTADPSLQIK
AGVQWGLFGS AVMHLGTEEH HAKWLPGIMN MDIPGCFAMT ETGHGSDVAS IATTATFDPA
TQEFVINTPF RAAWKDYIGN AAIDGLGAVV FAQLVTRGVN HGVHAFYVDL RDPKTKEFLP
GIGGEDDGVK GGLNGIDNGR LHFSNVRVPR ANLLNRYGNV DADGAYTSPI ASPGRRFFTM
LGTLVQGRVS LDGAAVAASK LALKTAIQYA TERRQFNASS HTDEEVLLDY QRHQRRLFTR
LATTYAAGFA HEQLLQKFDD VFSGAHDTDE DRQDLETLAA ALKPLSTWHA LDTLQECREA
CGGAGFLIEN RFASLRADLD VYVTFEGDNT VLLQLVAKRL LADYAKEFRN VDVGVLARYV
VSQAAGAAVH RTGLRQVAQF MADTGSVQKA AIALRDEDTQ RLLLTDRVQT MVAEAGAALK
GTNKLPQQKA AAAFNQHQHE LIEAAQAHAE LLQWEAFTEA LADVKDPGTK RVLTWLRDLF
GLSLIEKNLS WYLMNGRLSM QRARTVGDYI NRLLVKIRPH ALDLVDAFGY GPEHLRAAIA
TGAEKTRQDE ARAFFRTQRA DGKAPVDEKV LLARKARDTK APRR
|
|---|
| |