| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_1828 |
|---|
| Symbol | |
|---|
| ID | 4445657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | - |
|---|
| Start bp | 2047213 |
|---|
| End bp | 2049030 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639689646 |
|---|
| Product | glycoside hydrolase 15-related protein |
|---|
| Protein accession | YP_831318 |
|---|
| Protein GI | 116670385 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0799869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCAT TAATAGAGGA TTATGCGCTG CTCTCCGATC TTCACACCGG GCCCCTTGTT
TCGCGGCGGG GCAGCGTTGA CTGGCTGTGT TTCCCGCGGT TCGACTCGCC CTCGGTCTTT
GCTGCCCTAC TCGGGGGTGA GGAACATGGC CGATGGCTGT TGGCGCCGAG CGCGCCGGAG
GCCGTGGTCA TTGACCGCCA CTATGTCGAC TCGACGTTTG TACTCCAAAC AACATGGCAG
ACCGATGCCG GCGAGGTCTT AGTGACGGAC TTCATGCCGG TGGGTGACAG CCGTTCGCGT
CTTGTCCGTC GCATGACAGG ACTCAGCGGG ACGGTCCTCA TGCGCCACGA GATTAGAATA
CGACCCCAAT ACGCCACTGT GCTGCCTTGG GTGAGTCGGG TCCGTGATAG CGCGCCGGGT
CAGGCTGCGG AGATTCTCCT GGCCATGTCG GGTCCGGACG CCCTGGCCCT CCGGGGAGAA
GATCTTCCGA TTGCGGAAGG TCACCGACAT GCCGGGGAAT TTTTGGTTGC ACAGGGGAAG
AACGTGGACT TCGAACTGAC ATGGTTCCCC TCGCACCAGG ATGTGCCATC GGCCGTCAAT
GTCGATGCCG CCCTTGACCT GGCTGTGGCC TATTGGACCA CCTGGGCAGG AAATTGCCGC
GATGACGGCA AATACGGCAG TGCAGTGAAG CGTTCGCTGC TGGTGCTTCG TGCGCTCACC
CACTACGAGA CAGGCGGCAT TGTCGCTGCG CCCACCACAT CCCTACCGGA GGATTTCGGT
GGGTCACGCA ATTGGGACTA CCGCTACTGT TGGCTGCGCG ATGCCTCTTT GACGTTGGAA
GCCATGTTGA CACATGGCTA TGAATCCGAG GCGCTGAAGT GGCGCAACTG GCTTTTACGT
GCACTCGCGG GCGATCCGGA GGACCTGCAG ATTATGTACG GCGTGGGGGG TGAGCGGGAC
CTGACGGAAA AGGAACTCCC CCACCTTCCC GGATACCAGA ATTCCAGACC GGTGCGAATC
GGTAACGCTG CTGTGTCCCA GTACCAGGCT GACGTGGTCG GTGAAGTGAT GGTGGCACTT
GAAAGGCTTC GGCTGGCCGG AGGCAAGGAA GACCACTTCT CCTGGGCACT CCAGCGTGCG
CTGCTCGGAT CCGTGGAAAA TCACCTCGAG GACAAAGACT TCGGCCTGTG GGAAATGCGC
GGCGATGCCC AGTACTTCAC CCACTCCCGG GTGATGATGT GGGCCGCTTT TGACAGCGGA
GTGCGGGCTG TTCGCGATCA CGGCCTACCT GGACCGGCAG AGCATTGGGA GCAACTCCGT
GAGGGATTGG CCACGGAAAT CATGGATCTC GGATTCAACC GGGACCTCAA CTCCTTCACC
CAAACCTATG GCGGTCGGCA GACGGACGCT GCTCTGCTGG CCTTGCCGCA GGTTGGCTTC
CTTGCCTACG ACGATGAGCG CATGCTCGGT ACGGTTGACC AGCTGGAAAA GGAGCTGCTC
ACTACCGAGG GCCTGCTGAT GCGCTACCGA ACCGAAACAG GAGTTGACGG ATTAGAACCG
GGAGAACATG CGTTCCTCGC ATGCTCCTTC TGGCTAGTGG AACAGTACGC GCGGTCAGGC
CGCTGGGCCG ACGCCAGGAA CCTGATGGAC GTGCTGGCCG GGCTCGCCAA CGAGCTGGGC
CTGCTCAGCG AAGAATATTC AATGAAGGAA AAGCGGATGG CGGGAAACTT TCCACAAGCT
TTCTCCCATC TGACCCTAGT GCGGGCGGCA GACGCCATGC ACGGCGTGGA CCGGCTCAGC
CTGCATCCCA AACATTGA
|
|---|
| Protein sequence | MAALIEDYAL LSDLHTGPLV SRRGSVDWLC FPRFDSPSVF AALLGGEEHG RWLLAPSAPE
AVVIDRHYVD STFVLQTTWQ TDAGEVLVTD FMPVGDSRSR LVRRMTGLSG TVLMRHEIRI
RPQYATVLPW VSRVRDSAPG QAAEILLAMS GPDALALRGE DLPIAEGHRH AGEFLVAQGK
NVDFELTWFP SHQDVPSAVN VDAALDLAVA YWTTWAGNCR DDGKYGSAVK RSLLVLRALT
HYETGGIVAA PTTSLPEDFG GSRNWDYRYC WLRDASLTLE AMLTHGYESE ALKWRNWLLR
ALAGDPEDLQ IMYGVGGERD LTEKELPHLP GYQNSRPVRI GNAAVSQYQA DVVGEVMVAL
ERLRLAGGKE DHFSWALQRA LLGSVENHLE DKDFGLWEMR GDAQYFTHSR VMMWAAFDSG
VRAVRDHGLP GPAEHWEQLR EGLATEIMDL GFNRDLNSFT QTYGGRQTDA ALLALPQVGF
LAYDDERMLG TVDQLEKELL TTEGLLMRYR TETGVDGLEP GEHAFLACSF WLVEQYARSG
RWADARNLMD VLAGLANELG LLSEEYSMKE KRMAGNFPQA FSHLTLVRAA DAMHGVDRLS
LHPKH
|
|---|
| |