| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_1654 |
|---|
| Symbol | |
|---|
| ID | 4445811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | - |
|---|
| Start bp | 1847736 |
|---|
| End bp | 1849907 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639689469 |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase |
|---|
| Protein accession | YP_831148 |
|---|
| Protein GI | 116670215 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0454813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CAGATTTCCG TAAGCTTGCC GATCTTTTCC CCGACGAGAC GGTCACGCAT
TCGTATGTGC AGGACATCCA GCTGCCGGCA TCCGGCGGCA GGCCCAGCCC GGGAACCTTC
GCGCTGATCA CCCTGGACAA CGGACTGGAC CACTCCAAGC CCACCACGCT GGGCCCGAAC
ACCCTCGTGG AGCTGGGGAC GGTCCTCGAG GGCCTCAAGG ACCGTGCCGC CCGCGGCGAG
ATCGTGGGCG TCGGCGTCAC CGGGAAGCCT TATTACCTGG TGGCCGGCGC GGACCTGTCC
GCCGTCAAGT CCCTCAACAA CCGTGACCAC GGCCTCTGGA TGGCCCAGCT GGGCCATGAC
GTCTATGCCA CACTGGCCAA CCTGGGAGTG CCCAGCTTCG CCTTCATCAA CGGTGTGGCC
CTGGGCGGCG GGCTGGAGAT CGCCCTGCAG TCCACCTACC GCACGGTGTC CACAGGCGCC
GGCGCACTGG CACTTCCCGA AGCCTTCCTC GGCCTGGTGC CCGGCTGGGG AGGCGTATAC
ATCCTGCCGC GGCTGATCGG ACCCGAAAAC GCCGTCAAGG TGATGATCGA GAATCCGCTC
AGCAACAACC GGACGCTCAC CGGTCCGCAG GCCTTCAGCC TGGGAATTGC CGACGCCATC
TTCGAACCTG CGGACTTCGT GGAACAGTCC CTGGCCTGGG CCGCAGGCGT CATCTCGGGT
GAGGCAGCCC CGGAACGGCC CAACGCCGTC GAGCCGTCCG ACCCGGCCGT TGCCGAACGC
TGGGCGGCGG CCGTTGCCGC CGGACGCGGG TTCGTGGAGT CCAAGACGTC CAACGCGTCG
CCGGCGCCGG CAAAGGTGCT GGACATCATG GAGGCCAACA GGACCATGAG CCAGTCTGAC
TCGGCGGAGC TCGAGTGCGA GACCCTGGCC GGCCTCATGC AGACTGACGA GTTCCGCTCC
ACGGTCTACG CCTTCCTGGA CCTCGTGCAG AAGCGCTCCA AGCGTCCGGC GGGTGCACCT
GACCGCAAAC TGGCCCGGCC TGTGACCAAG GTAGGCGTGG TGGGCGCAGG CCTGATGGCC
AGCCAGCTTG CCCTGCTCTT CGCCCGGCAG CTCAAGGTCC CCGTCGTGAT GACTGACATC
GACCAGGCCC GCGTGGACAA AGGCGTGGGC TATGTCCACG CTGAAGTGGA CAAAATGCTG
GCTAAGAAGC GGATCAGTGC CGACGCCGCC AACCGCACCA AGGCGCTGGT CACCGGATCG
GTTTCCAAGG ATGCATTTGC CGATGCGGAC TTCGTCATCG AGGCCGTGTT CGAGGAACTG
AACGTCAAGA AGCAGGTGTT CGCGGAGGTG GAAGCGATTG TCTCCCCCGA GTGCATCCTC
GCCACCAACA CGTCCTCGTT GTCCGTCACC GCGATGGCTG CGGACCTGGC CCACCCGGAA
CGCCTGGTGG GATTCCACTT CTTCAACCCG GTGGCCGTGA TGCCGCTGCT GGAGATAGTC
CGCGCCCCCA AGACCGACGA CGCCGTGCTG GCCACCGCGT TTGAGCTCGC CAAGGGCCTG
AAGAAGACCG CAGTGCTGGT CAAGGATGCA GCGGCGTTCG TAGTCAACCG CATACTGCTG
CGCCTGATGG GCGAAGTGAC CGCCGCGTTC GACGAGGGGA CTCCGGCCGA GGTGGCGGAC
AATGCGCTGC GCCCGATGGG GCTGCCCATG ACTCCGTTCA CGCTTGGCGC GATGGTGGGC
CTGCCGGTGG CGCAGCACGT CCAGGAATCC CTGCACGCCG CGTTTGGACA CCGCTTCACC
GTTTCCCAGA ACCTGCAGAA GCTGATCGAC AACGGCGTGA CATCCATATG GGCGCCGGAC
AGGGGACCGG ACGGCAAGCC GTTCATTCCG GCGGAAACCC TGGCGCTGCT GTCCTTCGGC
ACGTCCCCCT CGACGGGTGA GGAAGTCCTG CGCCGGACGC AGGATGCGCT GGCCGAGGAA
ATCGGACTCA TGCTGGAAGA GGGCGTGGTG GCCGGACCGG AAGACATCGA CCTCTGCATG
ATCCTCGGGG CAGGGTGGCC GATGTTCCTC GGCGGCATCA CCCCGTACCT GGACCGGGTG
GGAGCCTCCG AGCGCGTCAA CGGCAAGCGG TTCCTGGCTC CGGGTGTCGC CTCCGCGGCG
GCCGCGGCCT AG
|
|---|
| Protein sequence | MSAADFRKLA DLFPDETVTH SYVQDIQLPA SGGRPSPGTF ALITLDNGLD HSKPTTLGPN
TLVELGTVLE GLKDRAARGE IVGVGVTGKP YYLVAGADLS AVKSLNNRDH GLWMAQLGHD
VYATLANLGV PSFAFINGVA LGGGLEIALQ STYRTVSTGA GALALPEAFL GLVPGWGGVY
ILPRLIGPEN AVKVMIENPL SNNRTLTGPQ AFSLGIADAI FEPADFVEQS LAWAAGVISG
EAAPERPNAV EPSDPAVAER WAAAVAAGRG FVESKTSNAS PAPAKVLDIM EANRTMSQSD
SAELECETLA GLMQTDEFRS TVYAFLDLVQ KRSKRPAGAP DRKLARPVTK VGVVGAGLMA
SQLALLFARQ LKVPVVMTDI DQARVDKGVG YVHAEVDKML AKKRISADAA NRTKALVTGS
VSKDAFADAD FVIEAVFEEL NVKKQVFAEV EAIVSPECIL ATNTSSLSVT AMAADLAHPE
RLVGFHFFNP VAVMPLLEIV RAPKTDDAVL ATAFELAKGL KKTAVLVKDA AAFVVNRILL
RLMGEVTAAF DEGTPAEVAD NALRPMGLPM TPFTLGAMVG LPVAQHVQES LHAAFGHRFT
VSQNLQKLID NGVTSIWAPD RGPDGKPFIP AETLALLSFG TSPSTGEEVL RRTQDALAEE
IGLMLEEGVV AGPEDIDLCM ILGAGWPMFL GGITPYLDRV GASERVNGKR FLAPGVASAA
AAA
|
|---|
| |