Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Arth_1617 |
Symbol | |
ID | 4445879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Arthrobacter sp. FB24 |
Kingdom | Bacteria |
Replicon accession | NC_008541 |
Strand | + |
Start bp | 1803200 |
End bp | 1804525 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639689432 |
Product | RNA polymerase, sigma 28 subunit |
Protein accession | YP_831111 |
Protein GI | 116670178 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00878104 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCCCGT CTTCCGCGAA GAAGGAACCC GCCGACCAGG CCGAATTGTC CCCTGAGGAG AAGAAGGCGG CGACGAGCGC CAAGCGTGCC GCCACGCGTG CAGCCAATAA GGCTGTCAAA GATGCTACTT CTGCCGAGGG CGGCGCCCCG GCAAAACCCG AGCCCAAAAA GCGCGGACCC AAGCCCGGCG CCAAGGCTGC CGCCGAGGCC GCCGGCAAGA CGCGCACGTC GGACGACGAC GATACAGAGG ACGTCGAACT GGATGAAGAT CTGGACGACG TGACTCCGGA TCCATCGGAG CTGACCGAGG AGGAAGCCGC CAGCAAGACC GGCGCTGCCG CCACCGGCAC CGGCTTCGTG TATTCCGATG CCGATGACGA CGACGCCCCG GTCCAGCAGG TCATGTCGGC CGGCGCCACC GCCGACCCCG TCAAGGACTA CCTGAAGCAG ATCGGCAAGG TTGCCCTGCT GAACGCTGAA CAGGAAGTGG ACCTTGCGCT CCGGATCGAG GCGGGCTTGT TCGCCGAAGA GAAGATCGCG GCGGACGACG GTTCCATGGA TCCGAAGCTC AAGCGTGAGC TCGAATTCGT CATCCACGAC GGCAAGCGCG CCAAGAACCA CCTGCTGGAG GCCAACCTCC GTCTCGTTGT CTCGCTGGCC AAGCGCTACA CCGGCCGCGG CATGCTGTTC CTGGATCTCA TCCAGGAAGG CAACCTTGGC CTCATCCGTG CAGTCGAGAA ATTTGACTAC ACCAAGGGCT TCAAGTTCTC TACCTACGCC ACGTGGTGGA TCCGCCAGGC CATTACCCGT GCCATGGCCG ACCAGGCCCG CACCATCCGC ATCCCGGTGC ACATGGTGGA AGTCATCAAC AAGCTGGCCC GTGTCCAGCG CCAGATGCTG CAGGACCTCG GCCGCGAACC TACGCCTGAG GAGCTGGCCC TCGAGCTGGA CATGACCCCC GAGAAAGTCG TGGAAGTCCA GAAGTACGGC CGCGAGCCGA TCTCGCTGCA CACCCCCCTG GGCGAGGACG GCGACTCCGA GTTCGGTGAC CTCATCGAGG ACTCCGAGGC TGTGGTTCCT GCCGACGCGG TCAGCTTCAC CCTGCTGCAG GAACAGCTCC ACTCGGTTCT GGACACGTTG TCCGAGCGCG AAGCCGGCGT TGTCGCCATG CGGTTCGGCC TGACCGACGG ACAGCCGAAG ACTTTAGACG AAATCGGCAA GGTCTACGGA GTGACGCGCG AGCGTATCCG CCAGATCGAA TCCAAGACGA TGTCCAAGCT GCGGCACCCG TCCCGGTCCC AGGTCCTGCG GGACTACCTG GACTAA
|
Protein sequence | MTPSSAKKEP ADQAELSPEE KKAATSAKRA ATRAANKAVK DATSAEGGAP AKPEPKKRGP KPGAKAAAEA AGKTRTSDDD DTEDVELDED LDDVTPDPSE LTEEEAASKT GAAATGTGFV YSDADDDDAP VQQVMSAGAT ADPVKDYLKQ IGKVALLNAE QEVDLALRIE AGLFAEEKIA ADDGSMDPKL KRELEFVIHD GKRAKNHLLE ANLRLVVSLA KRYTGRGMLF LDLIQEGNLG LIRAVEKFDY TKGFKFSTYA TWWIRQAITR AMADQARTIR IPVHMVEVIN KLARVQRQML QDLGREPTPE ELALELDMTP EKVVEVQKYG REPISLHTPL GEDGDSEFGD LIEDSEAVVP ADAVSFTLLQ EQLHSVLDTL SEREAGVVAM RFGLTDGQPK TLDEIGKVYG VTRERIRQIE SKTMSKLRHP SRSQVLRDYL D
|
| |