Gene Arth_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagArth_1587 
Symbol 
ID4445884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameArthrobacter sp. FB24 
KingdomBacteria 
Replicon accessionNC_008541 
Strand
Start bp1768740 
End bp1769498 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content67% 
IMG OID639689402 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_831081 
Protein GI116670148 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.580093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCT CAGCGGGGGG CGTTGCCCTG GTCACCGGGG CCAGCCGTGG AATCGGCGCC 
GCCATCGCCC TCCGCGCGGC ACGGGCCGGT TACGCCGTCC TGGTCAACTA TTCCGCGGAC
TCCGCCGGAG CTGCATCCAT AGTGCAGGAA ATTCGGGATG ACGGCGGCAC GGCGCTGGCG
CACCAGGCAG ACGTCAGCGA TCCGGAAGCG GTTGGATCAA TGTTCGACCA GGCGGCTACT
TTGGGCGCCG TCACGGCTGT GATCAACAAT GCGGGGATTA CGGGCAACCT GATCGGCAAC
CTCTCGGACG TTCCTCCGGC AACTGTCCGA CGAGTCATGG ACGTCAACGT GTCAGGGCTG
ATCTATGTCT GCCAGGAAGC GGTGCGGCGG CTCAGCACAG CCACTGGCGG ACCCGGCGGA
TCCATCGTCA ACATTTCTTC CACCGCGACG AAGGCCGGGT CGCCGGGCAC CTGGGCGCAT
TACGCAGCGT CGAAGGGTGC TGTTGATGTA CTCACGGTGG GGCTTGCCTC GGAAGTCGCT
GCGCAGGGAA TCCGGGTCAA CTGCGTCGCC CCCGGGAGCA CCAACACCGG CCTGCACGCA
GCAGCGGGAA TGCCCGACCG GGTGGAGCGC CTGAATCCGA CCATCCCCAT GGGCCGGGGC
GCCGAACCTG ACGAGGTTGC GGCTGCGGTG CTGTGGCTGC TGTCCCGTGA CGCCGGCTAC
ATTACCGGAG CCGTAGTCCC AGTGGCCGGA GGCCGCTGA
 
Protein sequence
MTASAGGVAL VTGASRGIGA AIALRAARAG YAVLVNYSAD SAGAASIVQE IRDDGGTALA 
HQADVSDPEA VGSMFDQAAT LGAVTAVINN AGITGNLIGN LSDVPPATVR RVMDVNVSGL
IYVCQEAVRR LSTATGGPGG SIVNISSTAT KAGSPGTWAH YAASKGAVDV LTVGLASEVA
AQGIRVNCVA PGSTNTGLHA AAGMPDRVER LNPTIPMGRG AEPDEVAAAV LWLLSRDAGY
ITGAVVPVAG GR