Gene Arth_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagArth_1516 
Symbol 
ID4445950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameArthrobacter sp. FB24 
KingdomBacteria 
Replicon accessionNC_008541 
Strand
Start bp1688216 
End bp1689028 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content67% 
IMG OID639689330 
Producthemolysin A 
Protein accessionYP_831010 
Protein GI116670077 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.559805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGGC TTGACCAGAT GCTCGTCGCC CGGGGGCTGG CGAGATCCCG CACCCACGCC 
GCGCGCCTGA TTGCCGAAGG CAAAGTCAGC TCGGAGGGCA CCGTTCTCGC GAAAGCCTCC
GCCCAGGTGG ATGACCTGAC GCCCCTGGAC GTTGCTGATG ACGGGCAGGA CACGTACGTC
AGCAGGGCAG GCCACAAACT GGCCGGGGCG CTGGAAGCTT TTCCGGAAGT CATTGCGGAA
GGCAAACGCT GCCTGGACGC CGGCGCTTCC ACCGGCGGCT TCACCGAGGT CCTGCTCAGG
CGCGGCGCGG ATCATGTGGT GGCTGTCGAC GTCGGACACG GCCAGCTGGT GCCCCAGCTC
CGGGACGACC CCCGCGTGTC GGTGCACGAA GGCCTCAACG TTCGTTACAT GACGCCGGAA
GAGATCGGCG GCCCGGCCGC GCTGACGGTC GCCGACCTGT CGTTCATTTC GCTGACCCTG
GTGTTGGAGC CGCTGGCGGC GTGCACGGAG CCCGGCGGCG ACCTGGTCCT GATGGTCAAG
CCGCAGTTCG AGATCGGCAA GGACCGGCTG GGCCGCACCG GTGTGGTGAA TTCCGGGCGT
GAACGCCGGA TGGCGGTGGA AAAAGTCGCC CAGGCAGCGC TCGACGCGGG GCTCGAACTT
CGCGGCCTCG CGGCAAGCCC CTTGCCCGGC CAGGACGGAA ACGTCGAATA CTTCCTGTGG
ATAAAGCGCA GGATCACCTC AGACTTGCCT AAGATCGAAG AGCGGGACGC AGCCGTTGCT
GCGTTGCTCG GAACAATCTG GCCGAACAAC TAG
 
Protein sequence
MARLDQMLVA RGLARSRTHA ARLIAEGKVS SEGTVLAKAS AQVDDLTPLD VADDGQDTYV 
SRAGHKLAGA LEAFPEVIAE GKRCLDAGAS TGGFTEVLLR RGADHVVAVD VGHGQLVPQL
RDDPRVSVHE GLNVRYMTPE EIGGPAALTV ADLSFISLTL VLEPLAACTE PGGDLVLMVK
PQFEIGKDRL GRTGVVNSGR ERRMAVEKVA QAALDAGLEL RGLAASPLPG QDGNVEYFLW
IKRRITSDLP KIEERDAAVA ALLGTIWPNN