Gene Arth_1404 details

Gene Information

• Locus tag: Arth_1404
• Symbol: ispG
• ID: 4446075
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Arthrobacter sp. FB24
• Kingdom: Bacteria
• Replicon accession: NC_008541
• Strand: +
• Start bp: 1563524
• End bp: 1564690
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639689215
• Product: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
• Protein accession: YP_830898
• Protein GI: 116669965
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
• TIGRFAM ID: [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.502797
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCTCGG TCAGCCTGGG AATGCCGTCA GCACCGCCGC CCGTCCTTGC CCCGCGCAGG 
AAGACCCGCC AGATCAAGGT GGGCTCGGTG GGCGTCGGCT CGGATTCGCC CATCAGCGTG 
CAGTCGATGA CCACCACGCC CACTACGGAC ATCAACGCCA CGCTGCAGCA AATTGCCGAG 
CTGACGGCCT CGGGCTGCGA CATCGTGCGC GTGGCCTGCC CCTCCGCAGA TGATGCGGAA 
GCCCTGCCGA TCATCGCGCG GAAGTCCCAG ATCCCCGTCA TCGCGGACAT CCATTTCCAG 
CCCAAGTACG TCTTCGCCGC CATCGAGGCG GGTTGTGCTG CGGTGCGCGT CAACCCCGGC 
AACATCCGTA AGTTCGATGA CCAGGTCAAG GAGATCGCCC GCGCCGCCAA GGACCACGGC 
ACCTCCATCC GGATCGGCGT CAATGCAGGA TCCCTGGAGC CCGGGATCCT GAAGAAGTAC 
GGCAAGGCAA CCCCCGAGGC CCTAGTGGAG TCAGCGGTCT GGGAAGCCTC GCTGTTCGAG 
GAGCATGGCT TCCACGACTT CAAGATCTCC GTCAAGCACA ACGACCCCGT GATCATGGTC 
GCCGCGTACG AGATGCTGGC AGAAAAGGGC GACTGGCCCC TTCACCTCGG CGTTACCGAG 
GCCGGACCGG CCTTCCAGGG CACCATCAAG TCCGCCACCG CCTTCGGCGC ACTCCTGTCC 
AGGGGCATCG GCGACACCAT CCGCGTTTCC CTCTCGGCCC CTCCCGTCGA GGAAATCAAG 
GTTGGCAACC AGATCCTGCA GTCCCTCAAC CTGCGCCCCC GCAAGCTCGA AATTGTCTCT 
TGCCCGTCCT GCGGCCGCGC CCAGGTGGAC GTCTACACCC TCGCCGAGCA GGTCACAGCG 
GGGCTGGAAG GCATGGAGAT CCCGTTGCGC GTGGCCGTCA TGGGCTGCGT CGTCAACGGC 
CCGGGCGAGG CGCGCGAAGC CGACCTCGGC GTGGCCTCCG GTAACGGCAA GGGACAAATC 
TTTGTGAAGG GAGAGGTCAT CAAGACTGTC CCTGAGAGCG AAATTGTTGA GACACTGATC 
GAAGAGGCCA TGCGAATCGC TGAAGAGATG GGGGAGGCCG ATGGCGAAGA TGCTGTCAAG 
GGTAGCCCCG TGGTTAGCGT CTCGTAA 

 

Protein sequence

MTSVSLGMPS APPPVLAPRR KTRQIKVGSV GVGSDSPISV QSMTTTPTTD INATLQQIAE 
LTASGCDIVR VACPSADDAE ALPIIARKSQ IPVIADIHFQ PKYVFAAIEA GCAAVRVNPG 
NIRKFDDQVK EIARAAKDHG TSIRIGVNAG SLEPGILKKY GKATPEALVE SAVWEASLFE 
EHGFHDFKIS VKHNDPVIMV AAYEMLAEKG DWPLHLGVTE AGPAFQGTIK SATAFGALLS 
RGIGDTIRVS LSAPPVEEIK VGNQILQSLN LRPRKLEIVS CPSCGRAQVD VYTLAEQVTA 
GLEGMEIPLR VAVMGCVVNG PGEAREADLG VASGNGKGQI FVKGEVIKTV PESEIVETLI 
EEAMRIAEEM GEADGEDAVK GSPVVSVS