Gene Arth_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagArth_1399 
Symbol 
ID4446070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameArthrobacter sp. FB24 
KingdomBacteria 
Replicon accessionNC_008541 
Strand
Start bp1559352 
End bp1560536 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content67% 
IMG OID639689210 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_830893 
Protein GI116669960 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCAC GCAGAATCGT TCTCCTCGGA TCCACCGGTT CCATCGGCAC CCAGGCGATT 
GACGTCGTCG ACGGCGCCCC GCACCTTTTC GAGGTTGTGG CACTGAGCGC AGGCGGCGGC
AACCTGGAAC TCCTTGCCCG CCAGGCCGTC CATACGAAGG CCAAGGCCGT CGGTACGGCC
AGTGGCGACG CCACCGCCCT GCAGCGCCTG ATTGACGACG CCGCCCGCGC CACCGGCGTG
GCAGGCTACC GACCGGAGAT CATCACCGGG CCGGACGCGT CAACCCGGAT CGCGGAAATC
GAAGCCGACG TGGTGCTCAA CGGCATCACC GGCTCCATCG GCCTGGCACC CACCCTCGCG
GCCCTGAAAT CCGGTGCCAC CCTTGCGCTG GCCAACAAGG AGTCGCTGAT CGTCGGCGGC
GCCCTCGTGA AGGCGGCCGC GCGCGAAGGC CAGATCGTCC CGGTGGACTC CGAACATTCG
GCGATCGCGC AATGCCTGCG TTCCGGGACC GCTGCCGAGG TGGACCGGCT CATCCTGACC
GCCTCGGGTG GCCCGTTTCG CGGCAGGACC CGCGAGGAAC TCCACAACGT CTCGCCGGAG
GAGGCCCTGG CGCACCCCAC CTGGGACATG GGGCTGATGG TCACTACCAA CTCCGCCAGC
CTGGTGAATA AAGGGCTGGA GGTAATCGAG GCTCACCTGT TGTTCGATAT CCCGCTGGAC
CGGATCGACG TGGTGGTCCA CCCGCAGTCC GTGGTCCACT CCATGGTGCA GTTCGTGGAC
GGCTCCATCA TCGCCCAGGC TTCGCCGCCG GACATGCGCC TGCCCATCGC CCTCGGCCTC
GGCTGGCCGG ACCGGGTGCC GAAGGCTGCC ACACCGTGCG ACTGGACCCA GGCCACCAGC
TGGACCTTCG AACCCCTGGA CGCCGAGGCA TTCCCGGCCG TAAACCTCGC CAAGGACGCT
GCCAAGCAGG GGAGCACATA CCCTGCCGTT TTCAACGCGG CCAATGAAGA GGCCGTGATG
GCCTTCCACG CCGGCCGGAT CCGGTTTACG GACATTGTGG ATACCATCGA AGCGGTACTC
AGCGAACACC CAGGATCTTC CGGGCTGACA GTTGAGTCCG TGCTGGATGC TGAAGCGTGG
GCACGAGCGC GCACCCACGA ACGTTTAGCA GTGAGCAGTC TCTAG
 
Protein sequence
MQPRRIVLLG STGSIGTQAI DVVDGAPHLF EVVALSAGGG NLELLARQAV HTKAKAVGTA 
SGDATALQRL IDDAARATGV AGYRPEIITG PDASTRIAEI EADVVLNGIT GSIGLAPTLA
ALKSGATLAL ANKESLIVGG ALVKAAAREG QIVPVDSEHS AIAQCLRSGT AAEVDRLILT
ASGGPFRGRT REELHNVSPE EALAHPTWDM GLMVTTNSAS LVNKGLEVIE AHLLFDIPLD
RIDVVVHPQS VVHSMVQFVD GSIIAQASPP DMRLPIALGL GWPDRVPKAA TPCDWTQATS
WTFEPLDAEA FPAVNLAKDA AKQGSTYPAV FNAANEEAVM AFHAGRIRFT DIVDTIEAVL
SEHPGSSGLT VESVLDAEAW ARARTHERLA VSSL