| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_1336 |
|---|
| Symbol | |
|---|
| ID | 4446140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | + |
|---|
| Start bp | 1498294 |
|---|
| End bp | 1499472 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639689144 |
|---|
| Product | nifR3 family TIM-barrel protein |
|---|
| Protein accession | YP_830830 |
|---|
| Protein GI | 116669897 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGTTG TAGCGACTCC TCCCGCCCCC AAGCTGGAAC TCCCGCCCCT GAAGCTGGGA
CCCCTCACGG TGGACACCCC CGTGATCCTG GCCCCCATGG CGGGCATCAC CAACTCCGCC
TTCCGCAGGC TCTGCCGTGA ATACGGCGGC GGCATGTACG TGGCGGAGAT GGTCACCTCG
CGTGCCCTCG TGGAGCGCAC CCCCGAGTCG CTGCGGATCA TCTCCCACGA CGACGACGAA
AAGGTCCGCT CCGTCCAGCT GTACGGCGTG GACCCCGTGA CCGTCGGGCA GGCGGTCCGG
ATGCTTGTCG AGGAGGACCG GGCGGACCAC ATCGACCTCA ACTTTGGCTG CCCCGTTCCC
AAGGTGACCC GGCGCGGCGG CGGATCAGCC CTGCCCTGGA AGATCGACCT GTTTACCTCG
ATCGTCCAGA CGGCCGTCAA AGAGGCGTCC AAGGGCAACG TCCCGCTCAC CATCAAGATG
CGCAAGGGCA TTGACGAGGA CCACCTCACG TACCTCGACG CGGGCCGCAT CGCACGTGAT
GCCGGCGTCG CCGCCGTCGC CCTCCACGGC CGCACCGCGG CGCAGTTCTA TTCCGGCCAG
GCTGACTGGT CCGCCATCGC CCGGCTGCGA GAAGCGCTGC CGGACATTCC GGTCCTGGGC
AACGGCGACA TCTGGTCCGC CGAGGATGCC GTGCGCATGG TCCGAGAGAC CGGCGTGGAC
GGCGTGGTGG TGGGCCGCGG CTGCCAGGGC AGGCCCTGGC TGTTCGGGGA TCTCCAGGCG
GCTTTCGAAG GCAGCGACAC CCGCCACAGG CCGAACCTGC GGCAAGTGGC GGAGGGCGTC
TACCGGCACG CGGAACTGAT GGTGGAAACC TTCGGCGACG AAGGCAAGGC CCTGCGGGAA
ATCCGCAAGC ACATGGCGTG GTACTTCAAG GGATACGTGG TGGGCGGGGA ACTGCGCACC
AGGCTTGCCC TGGTCACCAG CCTTCAGGTG CTGCGCGATA CGCTGGCCGA GCTGGACCAG
GATTCCCCGT ACCCGGGTGC GGACGCCGAA GGCCCCCGCG GCCGCGCCGG TTCGCCCAAG
AGGCCGGCGT TGCCCAAGGA CTGGCTGGAA TCCCGGGCGC TGAACGCCGA ACAGTCCCAG
GACATCTCCG CCGCGGAACT GGACGTGTCA GGTGGCTGA
|
|---|
| Protein sequence | MTVVATPPAP KLELPPLKLG PLTVDTPVIL APMAGITNSA FRRLCREYGG GMYVAEMVTS
RALVERTPES LRIISHDDDE KVRSVQLYGV DPVTVGQAVR MLVEEDRADH IDLNFGCPVP
KVTRRGGGSA LPWKIDLFTS IVQTAVKEAS KGNVPLTIKM RKGIDEDHLT YLDAGRIARD
AGVAAVALHG RTAAQFYSGQ ADWSAIARLR EALPDIPVLG NGDIWSAEDA VRMVRETGVD
GVVVGRGCQG RPWLFGDLQA AFEGSDTRHR PNLRQVAEGV YRHAELMVET FGDEGKALRE
IRKHMAWYFK GYVVGGELRT RLALVTSLQV LRDTLAELDQ DSPYPGADAE GPRGRAGSPK
RPALPKDWLE SRALNAEQSQ DISAAELDVS GG
|
|---|
| |