Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Arth_1227 |
Symbol | |
ID | 4446290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Arthrobacter sp. FB24 |
Kingdom | Bacteria |
Replicon accession | NC_008541 |
Strand | + |
Start bp | 1344858 |
End bp | 1346831 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639689035 |
Product | polysaccharide deacetylase |
Protein accession | YP_830721 |
Protein GI | 116669788 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.18341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTTC TGCAACGCTA CACTGCGGCC TCGGAGCCCC GGCACCGGGC TGAACGGCCT CCCGGCCGAC GCAAGGCCCG CTGGCTGGCG GCCTCCACAA CGGTGGCGCT CGCTGCCTCC CTTCTCGGAC TCACGGCTCC CGCCGCCAAC GCTGTTGGCG AAACTGTCGT GACGCTGACG TTCGACGACG CCAACGTTGA CCAGGTGGTT GCCGCCGACA AGCTGGTCTC GGCCGGCATG CGCGGGACGT TCTTCCTGCC CTCGGGGTTC ATGAACCAAA CGAACTATAT GACGACGGCC CAGGCACTGG CGTTGCAGGC CGCCGGACAC GAGATTGGCG GGCACAGTGT GACGCACGCC GATCTGGCCG CCGTAGGAAC TGACGAGCTC GCACGCCAGA TCTGCAATGA CCGGGCCACT CTGATGAGTT ATGGCCTGAA CGTGGAAAAC TTCGCATATC CTTTTGCCTC GGCAAGTCCG GCCGCAGAAG CTGAGGTCGG AACGTGCGGC TATAACAGCG CCCGCGGCTT GGGGGACATC CGGAGCAAGG TTGCGGGTTC GGAAACCTTC CCGTTTGCTG AATCGTTGAC GCCCGCTAAC CTCTTTTACA CCGGGGCACC GGACCAGCTG GACGAAACAT GGACCTTGGC GGATATCCAG AGCCTTGTCA CGCAGGCCCA GGCCAATGGC GGGGGTTGGG TCCAGCTGAC GTTCCACCAC GTCGGTACCG GCATCCTGGT TGGTTCACCT GTTAAGGATC CGCTGACCGT CAGCACGGAC ACCTTCAACC AGTTCATCGA CTGGCTGGCC GGCCAGAGGG ACACCAACAC CACCAACCCG GTCCAGGTTA AGACCGTGAA GGAAGTCATC GGCGGCACTC TCAAGGCAGC GCCCGCCGTT GTTCCGCCAC CGGCACCGCA GACCACCGGC AACCTGGTCA AGAACCCGAG CCTGGAGACC GCGGGCCTTA ACGGATCACT TCTCCCGCGG TGCTGGCAGG CCGGCGGCTA CGGCAACAAC ACCCGGACAT TCTCCACAGT GACCCCGGGA CACGCTGGTA CGGCCACTGC GTCGCAGCAG ATGGTGATCT CGGCCTACAC CGACGGCGAC GGCAAGCTGT TGCCCACCTT GGACACGGGT GAGTGCGCGC CCAGTGCAAC TCCGGGGCAC ACGTACCTTG CCAAGGCCTG GTATAAATCG ACCGGGGGGA ACACCCAGTT CAATCTGCAC TACCGGACGG CGTCCGGAAC ATGGACGTAC TGGACGGACA GCACTCTCTA CCTCCCGACA AATAACGTTT GGACCCAGCT GGCCTTTACG ACGCCCCCGG TTCCGGCCGG TGCAACGGCT ATCAGTTTCG GCTTGAACAT GATCGGCGTC GGGACCCTGG TCACTGACGA CTACGAACTG TACGACACTG CAGGCATCAA GACATTCAGC GATGTTGCCA CCAGCAACCA GTTCTACAAT GAGATCAGCT GGCTCTCCAA CAACCTGATC ACCCAGGGTT ACGCGGATGG TACCTTCCGG CCTCTGGCAT CGATCAACCG GGACGCGATG GCAGCGTTCC TGTACCGGTT GGCGGGCAGC CCCGCAGTGC CGGCCAACGC TCCGACGTTC ACCGACGTAG GTCCTACCAA CCAGTTCTAC AACGAGATCC GCTGGCTGGC GGCCCAAGGC ATCACCACCG GCTACACGGA CGGAACCTAC CGCCCGTTGG ACCCTGTCAA CCGCGACGCG ATGGCGGCGT TCCTTTACCG CTACAACGGC AAGCCGGCTG TGCCGACCAC CGCCCCCACG TTCCCTGACG TCACTACCGG CAACCAGTTC TACAACGAGA TCCGCTGGCT GGCAGCGACC GGGATCACCA CAGGCTACCC GGATGGCACA TTCCGTCCGG TTCAGCCGAT CAGCAGGGAC GCCATGGCAG CGTTCGTCTA CCGCTACAAC CTGAACTTCC CGAAGGGAAT GTAA
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Protein sequence | MTLLQRYTAA SEPRHRAERP PGRRKARWLA ASTTVALAAS LLGLTAPAAN AVGETVVTLT FDDANVDQVV AADKLVSAGM RGTFFLPSGF MNQTNYMTTA QALALQAAGH EIGGHSVTHA DLAAVGTDEL ARQICNDRAT LMSYGLNVEN FAYPFASASP AAEAEVGTCG YNSARGLGDI RSKVAGSETF PFAESLTPAN LFYTGAPDQL DETWTLADIQ SLVTQAQANG GGWVQLTFHH VGTGILVGSP VKDPLTVSTD TFNQFIDWLA GQRDTNTTNP VQVKTVKEVI GGTLKAAPAV VPPPAPQTTG NLVKNPSLET AGLNGSLLPR CWQAGGYGNN TRTFSTVTPG HAGTATASQQ MVISAYTDGD GKLLPTLDTG ECAPSATPGH TYLAKAWYKS TGGNTQFNLH YRTASGTWTY WTDSTLYLPT NNVWTQLAFT TPPVPAGATA ISFGLNMIGV GTLVTDDYEL YDTAGIKTFS DVATSNQFYN EISWLSNNLI TQGYADGTFR PLASINRDAM AAFLYRLAGS PAVPANAPTF TDVGPTNQFY NEIRWLAAQG ITTGYTDGTY RPLDPVNRDA MAAFLYRYNG KPAVPTTAPT FPDVTTGNQF YNEIRWLAAT GITTGYPDGT FRPVQPISRD AMAAFVYRYN LNFPKGM
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