| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_0250 |
|---|
| Symbol | |
|---|
| ID | 4447306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | + |
|---|
| Start bp | 261512 |
|---|
| End bp | 263062 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639688046 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_829751 |
|---|
| Protein GI | 116668818 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGTGATC AGCTTGCAGG CAGGCTTGGT TCCCTGTGGG CGGCCACCGG CGGACCGGTG
CAGTACGCCG CCCTCGATGA GGACCTGCAT GGTGCCCTCG ACGTTGACGT GGCCGTGATA
GGTGGCGGGA TCGCCGGCCT GACCGCTGCG CTGGCCCTCA AGCGGGCAGG CCAGACGGTG
GCCGTGCTTG AAGCAGCCCG CGTGGGCACC GGAGTCACCG CGAACACCAC CGGCAAGGTC
ACGTCCCTGC ACCGGCTGGC TTATACCGAA CTTGCGGGCC GCCACGGCAA AGAGGCGGCC
CGCACCTACG GCCAGGCCAA CGAAGCCGCC ATTGAGCACG TGGCGGACAC TGTGGCGGGC
GAAGGAATCG ACTGCGGCTT CAGGCGGGTT TCCAACTACA CCTACGCGGA ATCGGAGCGT
GCGCTCGCCC TGGTCCGGGA AGAAGCGGCG CTCGCCGGGA GGCTCGGGCT TCCGGCGTCC
TTTACTACCG AGGTGCCGCT GCCGTTACCG GTTGGATCGT TCCCGGTCGC CGGGGCGGTC
CGCTTTGATA ACCAGGCGCA GATCCACGCA CTCCGGTACG TGCAGGGCCT GGCCCGAGCT
GTGGACGGGG GCGGAAGTTT CGTCTTCGAG GACTCACCCG CCACGGGGTT CCGGGACGGC
TCTCCGGCTG TCGTCGACAC GGAGCGCGGA TCGGTCCGGG CGAAGGAAAT CATTGTCGCC
ACGAATATGC CGTTCGGCGA TAACGGATTC TTCGCGGGGC GAACCTACGC GCACCGCTCG
TACATCGTTG CTGCCCACAC TGACGCTGCC CCTTTGGATT CCACGTTTGT CAGCGTTGAA
GAACCGATGC GCTCCATCCT GACTACCGAC GTCGACGGCG TCAGCTACGT CCTTGCCGGC
GGTGAAGGGC ACCCCGCCTC GGAGCAGGTT GACTCCGCCG AACGGTACGG CAGGCTCGCC
GCGTTCGCCC GGGACCGCCT CGGCGCCGGA GAGATCGCCT TCCGCTGGTC CACCCAGGAC
GCCATGCCCG CCGACGGGCT GCCCTTCGTC GGGCGCCTGT CGCAGGACTT CCGGCATATC
CACGTGATCA CCGGGCTGCG CAAATGGGGG CTGACCAACG GAACGGCCGC CGCCCTGATC
CTCCGGGATC TGCTCTGCGG CCGCACCAAC CCGTGGGCGG CATTGTTTGA CAGCACCAGG
ACCGTCCCAG CACAAGGTGC CGTGCCTCCG GCGTCGGATC TTCGGGAGGC GGCCCCTCCC
AGGGAACCTC CTCAAAGGAC GCCGGCCGCA CCGCCCGAGG CCGCCCCGGG TCAAGGAAGG
GTCGTGGACG TAAACGGAGC AAAGACCGCC GTCTACGTCA GTCCTGCGGG CGGCGTCAGC
GCCGTTTCGG CCGTTTGCAC GCACCTGGGC TGCACGGTGG AGTTCAATGC GGCCGACGTG
ACATGGGACT GCCCGTGCCA CGGTTCCCGG TTCAGCACCG ACGGCACCGT CATCCAGGGG
CCGGCCACCC GGAACCTCGC GGCCAGCCCG GCCCCGGCGG ACCCCGGCTG A
|
|---|
| Protein sequence | MGDQLAGRLG SLWAATGGPV QYAALDEDLH GALDVDVAVI GGGIAGLTAA LALKRAGQTV
AVLEAARVGT GVTANTTGKV TSLHRLAYTE LAGRHGKEAA RTYGQANEAA IEHVADTVAG
EGIDCGFRRV SNYTYAESER ALALVREEAA LAGRLGLPAS FTTEVPLPLP VGSFPVAGAV
RFDNQAQIHA LRYVQGLARA VDGGGSFVFE DSPATGFRDG SPAVVDTERG SVRAKEIIVA
TNMPFGDNGF FAGRTYAHRS YIVAAHTDAA PLDSTFVSVE EPMRSILTTD VDGVSYVLAG
GEGHPASEQV DSAERYGRLA AFARDRLGAG EIAFRWSTQD AMPADGLPFV GRLSQDFRHI
HVITGLRKWG LTNGTAAALI LRDLLCGRTN PWAALFDSTR TVPAQGAVPP ASDLREAAPP
REPPQRTPAA PPEAAPGQGR VVDVNGAKTA VYVSPAGGVS AVSAVCTHLG CTVEFNAADV
TWDCPCHGSR FSTDGTVIQG PATRNLAASP APADPG
|
|---|
| |