Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Arth_4500 |
Symbol | |
ID | 4443321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Arthrobacter sp. FB24 |
Kingdom | Bacteria |
Replicon accession | NC_008537 |
Strand | - |
Start bp | 122570 |
End bp | 124339 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639687553 |
Product | conjugative transfer gene complex protein |
Protein accession | YP_829250 |
Protein GI | 116662195 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.610328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCAC CGAACCGCAA AGGCATGGGC CTGGGGGACG CCATCCTGAT CTGGCTGGCC ATCGGCTTCA TCGTCATCGT CGGCGGCGGC GCGTACGCCG CCGTGCACAT CGGCTCATGG ATGGCCGGCC TGCCGAGCCC TCCGGGCCAC CCCATCGACC TGATCGCCGG CCTCGTGAAG GGCAAAGTCA TCTGGCCGGC CCAGGCCACC GTCGTCGTGG CCGTCATGGC CGGCCTGGTC CTCGCCCTGG CGATCCTCGT GTTCTGGGCT TGGCGGAAGG GTGCCTCCAA GCGTGCCCGG GTCGACAAAG CCGCCCGGTA CCTCGGCCGC GGCAAGAACC TCACCGCGTT CTCCGGAAAG GGCGCCCAAG CCACCGCAGA CCGACTGGGC GTCACCGGCA ACCCGGGCAT CGTCGTGGGC AAGGTCGTCT CCACCGGGCA AACGTTCATC CAGTCCTGGG AAGACCTCAG CCTCGATATA TGGGGACCCC GGACCGGTAA GTCCACCTCA CGGGTCATGC CGGCGATCCT GGACGCGCCC GGCGCTGTCG TCTCTACCTC GAACAAGCGG GACGTCGTTG ACGGCACCCG TGGCGTCCGC GCCGCCACCG CCCCTGTCTG GGTCTTTGAC CCGCAGAAAA TCGCTCAGGA AGAGCCCGAC TGGTGGTGGA ACCCGCTCTC CTACGTCACC GACGAAGAGA AGGCCTACAA GCTCACACAG CACTTCTCCG TCGGCTCCCG CGTCCCGGGG TCCAAGCCGG ACGCTTACTT CGACCCCAAG GCCGAAGACA TACTCTCCTC CTACTTCCTC GCCGCAGCCC TCGGGGACCT GCCCATCACG CAGGTCTACT TCTGGGTCAC CGAACAGGTG AGCCAGGAAC CAATCGAGAT CCTGAAAGAG CACGACTACG AGCTTCAATA CCGGGGCCTG GAATCCACGC TCAAGCTCGC GGACAAGCAG CGCGACGGAA TCTTCGGCAC CGCCGAGAAG ATGATCCAGT GCCTCAAGAG CCGCAACACC CTCCGCTGGG TCGCCCCCAC CGGAGGAGCC ACGGTCACCA CGGACTCCCG GCGGCAATTC AACCCCCACG CCTTCGCCGC ATCCCAGGAA ACGATCTACA TCCTTTCCAA AGAAGGTGCC GGCTCCGCCG CCCCGCTCAC CACAGCCCTG ACAGTGGCCA TCGCAGAAGC CATGGAAGAA CGGGCAGAAC GCAGAGGCGG ACGCCTCCCC AAGCCGGCCC TGTTTGCTCT GGACGAGCTG GCCAACGTCG TCCGCTGGGC CGGCCTGCCG GACCAGTTCA GCCATTACGG CTCCAAAGGC CTGATCGTCA TGGGCATCCT GCAGTCCTGG TCCCAGGGCG TCGAACTCTG GGGAGAGGCG AACATGCGCA AGATCTGGTC CGCCGCGAAC GTCAAGGTAT ACGGCGGCGG CGTCGCCGAA GAAGGATTCC TCCGCGCCCT CTCAGACCTC ATCGGGGACT ACAGCTACAC CAACGTCTCC ATCAGTTCCG GCAAAACCGG GTCCAGCCGC TCCCGCCAGG AAGGGAAGGA ACGCATCTTC GACGTATCCA ACCTCGCCGA GCTGGACCGC GGCCGCGCCG TCATCCTCGC ATCCGGCGCC CCCGCCACAC TCGTCCGCAC CATGCCCTGG TACACCGGCA CACACAAGGA CGCTGTGGAA GCGTCGATCA AGCAGTACAG CCCGCGCCCC GAAGAGGAAG CTGTGCCGGT CGCTGCCGTG CCGGGCTCCA ACCCCTGGGT CACAGGCTAG
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Protein sequence | MSAPNRKGMG LGDAILIWLA IGFIVIVGGG AYAAVHIGSW MAGLPSPPGH PIDLIAGLVK GKVIWPAQAT VVVAVMAGLV LALAILVFWA WRKGASKRAR VDKAARYLGR GKNLTAFSGK GAQATADRLG VTGNPGIVVG KVVSTGQTFI QSWEDLSLDI WGPRTGKSTS RVMPAILDAP GAVVSTSNKR DVVDGTRGVR AATAPVWVFD PQKIAQEEPD WWWNPLSYVT DEEKAYKLTQ HFSVGSRVPG SKPDAYFDPK AEDILSSYFL AAALGDLPIT QVYFWVTEQV SQEPIEILKE HDYELQYRGL ESTLKLADKQ RDGIFGTAEK MIQCLKSRNT LRWVAPTGGA TVTTDSRRQF NPHAFAASQE TIYILSKEGA GSAAPLTTAL TVAIAEAMEE RAERRGGRLP KPALFALDEL ANVVRWAGLP DQFSHYGSKG LIVMGILQSW SQGVELWGEA NMRKIWSAAN VKVYGGGVAE EGFLRALSDL IGDYSYTNVS ISSGKTGSSR SRQEGKERIF DVSNLAELDR GRAVILASGA PATLVRTMPW YTGTHKDAVE ASIKQYSPRP EEEAVPVAAV PGSNPWVTG
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