| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1979 |
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| Symbol | mnmA |
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| ID | 4437431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 1830931 |
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| End bp | 1832052 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639677539 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_821280 |
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| Protein GI | 116628661 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.933421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGATA ATTCAAAAAC ACGTGTTGTT GTTGGTATGA GTGGTGGCGT TGATTCATCA
GTAACAGCCT TACTTTTAAA AGAACAAGGT TATGATGTAA TCGGTGTTTT CATGAAAAAC
TGGGATGACA CGGATGAATT TGGTGTGTGT ACAGCAACCG AAGATTATAA AGATGTAGCA
GCAGTGGCTG ATCAGATTGA TATCCCTTAT TACTCTGTCA ACTTTGAAAA AGAGTACTGG
GATCGTGTAT TTGAGTATTT CTTAGCAGAG TACCGTGCAG GACGTACCCC TAATCCAGAC
GTTATGTGTA ATAAGGAAAT CAAGTTTAAG GCTTTCTTAG ATTATGCGAT GACATTGGGA
GCGGATTATG TGGCTACAGG GCATTACGCC CAAGTTGTTC GCGATGAAGA TGGCATTGTC
CATATGTTGC GTGGTGCAGA TAACAATAAA GATCAAACCT ACTTCCTTAG TCAACTTTCG
CAAGAGCAGT TGCAGAAAGC GATGTTTCCT TTAGGACATC TGCAAAAGTC AGAAGTTCGT
GAAATTGCTG AACGTGCTGG TCTTGCAACA GCCAAGAAAA AAGATTCAAC AGGAATATGT
TTTATTGGTG AGAAAAACTT TAAAGAGTTT CTTAGTCAAT ACTTACCAGC TCAAAAAGGC
CGTATGATGA CCGTCGATGG TCGTGATATG GGTGAACATA ACGGACTCAT GTATTACACC
ATTGGTCAAC GTGGTGGTAT GGGTATTGGT GGTCAAAAAG GCGGAGATAA TGCTCCTTGG
TTTGTAGTAG GGAAAGATCT TTCTAAAAAT ATTCTTTACG TGGGTCAAGG TTTCCACCAT
GAGTCGTTGA TGTCCACTTC ACTTGACGCT TCAACGATTC ACTTTACGCG TGATATGCCG
GAAGAATTTG AAATGGAATG TACAGCAAAA TTCCGTTATC GTCAACCTGA TAGTAAAGTT
ACTGTAAAGG TTAAAGGTGA TAAATCTGAG GTGATTTTTG CTGAACCTCA ACGTGCTATT
ACACCTGGGC AAGCTGTTGT TTTTTATGAT GGACAGGAAT GCTTAGGTGG TGGTATTATA
GACCAAGCCT ATAAAGACGG AAAAGTTTGT CAGTATATTT AA
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| Protein sequence | MTDNSKTRVV VGMSGGVDSS VTALLLKEQG YDVIGVFMKN WDDTDEFGVC TATEDYKDVA
AVADQIDIPY YSVNFEKEYW DRVFEYFLAE YRAGRTPNPD VMCNKEIKFK AFLDYAMTLG
ADYVATGHYA QVVRDEDGIV HMLRGADNNK DQTYFLSQLS QEQLQKAMFP LGHLQKSEVR
EIAERAGLAT AKKKDSTGIC FIGEKNFKEF LSQYLPAQKG RMMTVDGRDM GEHNGLMYYT
IGQRGGMGIG GQKGGDNAPW FVVGKDLSKN ILYVGQGFHH ESLMSTSLDA STIHFTRDMP
EEFEMECTAK FRYRQPDSKV TVKVKGDKSE VIFAEPQRAI TPGQAVVFYD GQECLGGGII
DQAYKDGKVC QYI
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