Gene STER_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1973 
SymbolrpsD 
ID4437425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1823718 
End bp1824329 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content42% 
IMG OID639677533 
Product30S ribosomal protein S4 
Protein accessionYP_821274 
Protein GI116628655 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000312348 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGTT ATACAGGTCC ATCATGGAAA CAATCACGTC GCCTTGGTTT CTCACTTACA 
GGCACAGGTA AAGAATTGGC ACGTCGTAAC TACGTACCAG GTCAACATGG CCCAAATAAC
CGTTCAAAAC TTTCAGAGTA CGGTTTGCAA TTGGCTGAAA AACAAAAGCT TCGTTTCTCA
TACGGTTTGA GTGAAAAACA ATTCCGTAAC TTGTTCGTAC AAGCTACTAA AGTTAAAGGT
GGAACACTTG GTTTCAACTT TATGATTCTT TTGGAACGTC GTCTTGATAA CGTTGTGTAC
CGTCTTGGTC TTGCAACAAC TCGTCGTCAA GCGCGTCAAT TTGTAAACCA CGGTCATATC
CTTGTTGACG GTAAACGTGT TGATATCCCT TCATACCGCG TTGAAGTTGG TCAAGTAATC
TCAGTTCGTG AAAAGTCAGC TAAAGTTCCT GCTATCCTTG AAGCAGTAGA AGCTACTATC
GGACGTCCAG CATTCGTATC ATTTGATGCT GAAAAACTTG AAGGTTCATT GACACGTCTT
CCAGAACGTG ATGAAATCAA CCCAGAAATC AACGAAGCAC TTGTCGTTGA ATTCTACAAC
AAAATGCTTT AA
 
Protein sequence
MSRYTGPSWK QSRRLGFSLT GTGKELARRN YVPGQHGPNN RSKLSEYGLQ LAEKQKLRFS 
YGLSEKQFRN LFVQATKVKG GTLGFNFMIL LERRLDNVVY RLGLATTRRQ ARQFVNHGHI
LVDGKRVDIP SYRVEVGQVI SVREKSAKVP AILEAVEATI GRPAFVSFDA EKLEGSLTRL
PERDEINPEI NEALVVEFYN KML