Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1973 |
Symbol | rpsD |
ID | 4437425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1823718 |
End bp | 1824329 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639677533 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_821274 |
Protein GI | 116628655 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000312348 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACGTT ATACAGGTCC ATCATGGAAA CAATCACGTC GCCTTGGTTT CTCACTTACA GGCACAGGTA AAGAATTGGC ACGTCGTAAC TACGTACCAG GTCAACATGG CCCAAATAAC CGTTCAAAAC TTTCAGAGTA CGGTTTGCAA TTGGCTGAAA AACAAAAGCT TCGTTTCTCA TACGGTTTGA GTGAAAAACA ATTCCGTAAC TTGTTCGTAC AAGCTACTAA AGTTAAAGGT GGAACACTTG GTTTCAACTT TATGATTCTT TTGGAACGTC GTCTTGATAA CGTTGTGTAC CGTCTTGGTC TTGCAACAAC TCGTCGTCAA GCGCGTCAAT TTGTAAACCA CGGTCATATC CTTGTTGACG GTAAACGTGT TGATATCCCT TCATACCGCG TTGAAGTTGG TCAAGTAATC TCAGTTCGTG AAAAGTCAGC TAAAGTTCCT GCTATCCTTG AAGCAGTAGA AGCTACTATC GGACGTCCAG CATTCGTATC ATTTGATGCT GAAAAACTTG AAGGTTCATT GACACGTCTT CCAGAACGTG ATGAAATCAA CCCAGAAATC AACGAAGCAC TTGTCGTTGA ATTCTACAAC AAAATGCTTT AA
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Protein sequence | MSRYTGPSWK QSRRLGFSLT GTGKELARRN YVPGQHGPNN RSKLSEYGLQ LAEKQKLRFS YGLSEKQFRN LFVQATKVKG GTLGFNFMIL LERRLDNVVY RLGLATTRRQ ARQFVNHGHI LVDGKRVDIP SYRVEVGQVI SVREKSAKVP AILEAVEATI GRPAFVSFDA EKLEGSLTRL PERDEINPEI NEALVVEFYN KML
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