Gene STER_1960 details

Gene Information

• Locus tag: STER_1960
• ID: 4437471
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus thermophilus LMD-9
• Kingdom: Bacteria
• Replicon accession: NC_008532
• Strand: +
• Start bp: 1814902
• End bp: 1815468
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 639677522
• Product: hypothetical protein
• Protein accession: YP_821263
• Protein GI: 116628644

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.062191
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAAAA ACAAAAAAAT ATTTTACCTT ATTTTATGTA TTTTAATCTT GACAATTTTG 
ATTCCTATTT TGCTAGATTA TCTTAAATTC AGTGGCTTAG GACTTCATTT AGTTGATTGG 
AATCAAAATT CCTTTTTAGA ATTTTATCTT TCAAGATATA TTTTCTGGGG TGCTCTAGTA 
CTTTCAGCTG TAGTGTGGTT TCTAATGCTT GTTACACTCT TTTATCCTAA ACAATATTTA 
GAGATTCAGT TACCTGATGT CGATGGGAAC CTAAAATTAA AAAATTCAGC TATTGAAGGA 
TTTGTACGTT GTGTGGTTGC TAATCACAAT TTTATAAAGG ATCCTACTAT TAAGGTAAAC 
TGTCGTAAGA ATAAATGTTT AGTTCACGTA GAAGGACAAA TGCTTCCATC AGACAACATT 
ATTAAACGAA CTCAAATAAT TAAAGATGAG ATAGCTGATG GATTGAAACA GTTTTTTGGA 
ATGAATCATC GTGTAAAACT GTATATTTCT GTAAAAGAAT ACAAGCCAAA ACCACCACGT 
AAAAAAACTG TTAGTCGTGT AAAGTAA 

 

Protein sequence

MSKNKKIFYL ILCILILTIL IPILLDYLKF SGLGLHLVDW NQNSFLEFYL SRYIFWGALV 
LSAVVWFLML VTLFYPKQYL EIQLPDVDGN LKLKNSAIEG FVRCVVANHN FIKDPTIKVN 
CRKNKCLVHV EGQMLPSDNI IKRTQIIKDE IADGLKQFFG MNHRVKLYIS VKEYKPKPPR 
KKTVSRVK