Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1950 |
Symbol | hisS |
ID | 4437461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1807719 |
End bp | 1808999 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639677515 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_821256 |
Protein GI | 116628637 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTC AAAAACCTAA GGGAACGCAG GATATTTTAC CTGGGGATAG TGCCAAATGG CAGTACGTGG AGAATGTTGC ACGTGAAACA TTTAAAAAAT ACAATTATGG TGAAATTCGT ACGCCTATGT TTGAACATTA CGAGGTCATT TCACGTTCAG TAGGTGATAC AACTGATATC GTTACTAAGG AAATGTATGA TTTTCATGAT AAGGGAGACC GTCATATTAC ACTCCGCCCA GAAGGAACAG CACCGGTTGT ACGCTCTTAT GTAGAAAACA AACTCTTTGC GCCAGAGGTC CAAAAACCTG TTAAAGTTTA TTATATTGGA TCAATGTTCC GTTATGAACG TCCTCAAGCA GGACGCTTGC GCGAGTTCCA CCAACTAGGT GTAGAGTGCT TTGGCTCAAA AAATCCAGCA ACAGATGTTG AAACAATTGC CATGGCCTAC CAACTCTTTA ATACGCTTGG CATTAAGGAT GTTACTCTTC ATTTGAATAG TCTTGGAAAT ACTGACAGTC GTCTGGCTTA TCGTCAGGCC TTGATTGACT ATTTGACACC AATGCGCGAG AGTTTGTCAA AAGATAGCCA ACGCCGTTTG GAAGAAAATC CTTTGCGAGT ACTTGATTCA AAAGAAAAAG AAGATAAGGT TGCAGTTGAA AATGCTCCAT CTATCCTTGA TTATTTAGAT GAAGAAAGTC AAACTCACTT TGATGAAGTG CGTGCCATGC TCGATAGTCT TAACATTCCA TATGTGATTG ATACCAATAT GGTACGTGGT CTGGATTACT ATAACCACAC GATTTTTGAA TTTATTACCA CTATTGACAA GTCTGAGTTA ACAATCTGTG CGGGCGGTCG TTATGATAGT TTGGTTGAAT ATTTCGGTGG TCCAGAAACA GCTGGATTTG GTTTTGGACT TGGTTTAGAA CGCTTGCTTT TGGTTCTTGA TAAGCAAGGC ATTAAACTTC CGGTAGAAGA AAGTCTTGAT GTCTACATTG CAGTACTTGG TTCGGGCGCT AATGGCAAAG CTCTTGAGTT AGTTCAATCC ATCCGCTACC AAGGATTTAA AGCTGAACGT GATTACCTTG GACGTAAGAT TAAGGCACAG TTTAAGTCAG CAGATACCTT CAAAGCCAAG ACTGTTATCA CATTAGGTGA GAGTGAAGTG GAGTCAGGTG TGGTTAAGGT CAAAAATAAT GCTACTCGTG AGGAAGTTAC TGTAAGTTTT GAAGAGCTAA CTACAAACTT CGCAACAGTC CTCAAACAGT TAGAAAAGTA G
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Protein sequence | MKLQKPKGTQ DILPGDSAKW QYVENVARET FKKYNYGEIR TPMFEHYEVI SRSVGDTTDI VTKEMYDFHD KGDRHITLRP EGTAPVVRSY VENKLFAPEV QKPVKVYYIG SMFRYERPQA GRLREFHQLG VECFGSKNPA TDVETIAMAY QLFNTLGIKD VTLHLNSLGN TDSRLAYRQA LIDYLTPMRE SLSKDSQRRL EENPLRVLDS KEKEDKVAVE NAPSILDYLD EESQTHFDEV RAMLDSLNIP YVIDTNMVRG LDYYNHTIFE FITTIDKSEL TICAGGRYDS LVEYFGGPET AGFGFGLGLE RLLLVLDKQG IKLPVEESLD VYIAVLGSGA NGKALELVQS IRYQGFKAER DYLGRKIKAQ FKSADTFKAK TVITLGESEV ESGVVKVKNN ATREEVTVSF EELTTNFATV LKQLEK
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