Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1935 |
Symbol | |
ID | 4437484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1793858 |
End bp | 1795126 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639677500 |
Product | recombination factor protein RarA |
Protein accession | YP_821241 |
Protein GI | 116628622 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0363606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGATA ATCTTGCCTT ACGCATGCGT CCACGTTCAA TTTCAGAGGT GATTGGTCAG AAACATTTAG TTGGTGAAGG TAAAATTATT CGCCGTATGG TAGAGGCGAA TATGCTGTCG TCAATGATTC TCTACGGACC TCCAGGAATC GGGAAAACCT CGATAGCCAG TGCTATTGCA GGAACAACAA AATTTGCTTT TAGAACTTTT AATGCCACTG TCGATAGCAA AAAACGTCTA CAGGAAATTG CAGAAGAGGC TAAATTTTCA GGTGGTTTAG TTCTACTTCT AGATGAGATC CATCGTTTGG ATAAAGCGAA ACAAGATTTT TTGTTACCAT TATTAGAGAA CGGAAATATT ATCATGATTG GTGCCACAAC CGAGAATCCG TTTTTTTCTG TAACACCAGC CATCCGTAGC CGTGTACAAA TATTTGAGTT GGAACCACTC TCTAATGAAG ATATCAAGGA AGCTATTTTG AATGTTCTAG GGGACAAGGA GCGTGGCTTC GCCTTTGAGG TTCACTTAGA TGATGATGCT CTAGATTTTA TTGCGACAGC TACTAATGGT GATTTACGAT CGGCATATAA TTCTTTGGAT CTGGCTGTCA TGTCGACACC AGCTTCAGGA AATGGTCAGC ATCATATTAC CCTAGACATA GTGGAAAATA GCTTACAACG CAGTTATATT ACTATGGATA AAGACGGTGA TGGGCACTAT GATGTCCTTT CTGCCTTGCA AAAATCTATT CGAGGATCTG ATGTTAATGC CAGTCTTCAC TATGCGGCAC GTTTGGTTGA GGCAGGGGAT TTGCCTAGTC TAGCACGTCG CTTGACTGTG ATTGCCTATG AGGATATTGG TTTAGCTAAT CCAGATGCAC AAGTTCACAC GGTCACAGCC TTGGAAGCTG CACAGAAAAT AGGTTTTCCG GAGGCACGTA TTTTGATTGC CAACGTAGTT ATTGACTTAG CATTATCACC TAAGTCGAAT TCGGCTTATA AGGCAATGGA TGCTGCCCTG GCGGATCTTA GAAAGTCTGG GAATTTACCT ATTCCGCGTC ATCTGAGAGA TGGACACTAT GCTGGAAGTA AGGCACTGGG TAATGCACAA GATTATAAGT ATCCACATGC CTATCCTGAA AAGTGGGTTA AGCAACAATA CCTTCCAGAT AAATTAAGAG GAGTCAATTA TTTCCAACCT AATGAAACTG GGAAATACGA AAGAGCTCTT GGAGCTAATA AAGAACGAAT CGATAAGTTA TCTAGATAA
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Protein sequence | MPDNLALRMR PRSISEVIGQ KHLVGEGKII RRMVEANMLS SMILYGPPGI GKTSIASAIA GTTKFAFRTF NATVDSKKRL QEIAEEAKFS GGLVLLLDEI HRLDKAKQDF LLPLLENGNI IMIGATTENP FFSVTPAIRS RVQIFELEPL SNEDIKEAIL NVLGDKERGF AFEVHLDDDA LDFIATATNG DLRSAYNSLD LAVMSTPASG NGQHHITLDI VENSLQRSYI TMDKDGDGHY DVLSALQKSI RGSDVNASLH YAARLVEAGD LPSLARRLTV IAYEDIGLAN PDAQVHTVTA LEAAQKIGFP EARILIANVV IDLALSPKSN SAYKAMDAAL ADLRKSGNLP IPRHLRDGHY AGSKALGNAQ DYKYPHAYPE KWVKQQYLPD KLRGVNYFQP NETGKYERAL GANKERIDKL SR
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