| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1915 |
|---|
| Symbol | |
|---|
| ID | 4437502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1776114 |
|---|
| End bp | 1777283 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 24% |
|---|
| IMG OID | 639677483 |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_821225 |
|---|
| Protein GI | 116628606 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.488655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAA AACAAATTTT TCATTATCTA TTTGCAACTT TCTTAGTTAC AGTTGCCTAT
ACACTACCTC ATTCAATACT TACAGTCTTA TTACTAGAAA AAGGACTATC AATTTCTCAA
ATATTAATAA TACAGTCTGC ATACAGTCTA GCAATTATAT TGTTTGAATT TCCAAGTGGA
ATGCTATCAG ACAATTGGTC AAGAAAGTAT TTATACTTAT CATCAAGAGT TTTATTAATA
ATTATGTTTC TTATTGTCCT TATATCTTCC AACTTCTATT TTTTATATTT AGCTTGGTTT
ATATATGGGA TTGCAGCAGC ATTTGAAAGC GGTACTTTGG ATTCCTATTT AATAAATAAA
TTGAAACGTT CATCTAATGA TAAACTTATT GAATCTTTTA TTTCTAAAGA TAATAAAATT
CAATTTGCAT CTATGATTAT CGGTAGTGGT ATAGGTGGTA TTCTATATTT TATGATAGGT
ATAAAAATAT ATATTATTGC TATAATATTA GTTTGTTTAT CTATTTTTGA TATTGGCTTT
TTCTTCCAAG AAGATAGAGA TTACTATAAA GAAAAAATAA ATATAGATAC TTTTAAGAAA
CAAATTTCTA TAAGTTTTAA AGAGCTAAAA GAAAATAGTA TTCTTAGAGT TATTATTGTT
TTTGACTTAT TAACACAGTT ATTTTTTCAA GCACATTTTC AATTGTGGCA ATCCTTTTTA
TTGGAAAAAG GTATTGATAA ACGATATTTC ACAGCTTTCT ATTTTCTTTT TCAAATAATC
AGTATCCTAT CCTATTCTAT ACATACAGAC AAACTACAAA AGTTAGTTAA CTATCGATTA
TTTCTCTTAT TAGTTATTGC CTTGCCTTTA TTTTTCTTAT CAAACTTGCC CGTAGTTTAT
CTTATAGCCT ATATTTTATA TGTCTTTATA TTTTATATAA TTCAATTTGT CCTAAATATA
TATTTTAATA AACAGGTATC AACGAAAACA ATATCTTCGT TAATATCTCT CAAGTCAACA
ATCTCTAGGA TAAGTGGATT ATTAATTTTA TATGCTTTAA GTTTTTTACT GAATTATATG
AGCGTTAGTC TTGTGATAAG CTTAGCATTC ATTCTCTCCC TTTTATCTAT ATTATTGTTA
TTAAATTACT TTATTAAAAA TTATATTTAA
|
|---|
| Protein sequence | MIKKQIFHYL FATFLVTVAY TLPHSILTVL LLEKGLSISQ ILIIQSAYSL AIILFEFPSG
MLSDNWSRKY LYLSSRVLLI IMFLIVLISS NFYFLYLAWF IYGIAAAFES GTLDSYLINK
LKRSSNDKLI ESFISKDNKI QFASMIIGSG IGGILYFMIG IKIYIIAIIL VCLSIFDIGF
FFQEDRDYYK EKINIDTFKK QISISFKELK ENSILRVIIV FDLLTQLFFQ AHFQLWQSFL
LEKGIDKRYF TAFYFLFQII SILSYSIHTD KLQKLVNYRL FLLLVIALPL FFLSNLPVVY
LIAYILYVFI FYIIQFVLNI YFNKQVSTKT ISSLISLKST ISRISGLLIL YALSFLLNYM
SVSLVISLAF ILSLLSILLL LNYFIKNYI
|
|---|
| |