Gene STER_1907 details

Gene Information

• Locus tag: STER_1907
• Symbol: rplC
• ID: 4437494
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus thermophilus LMD-9
• Kingdom: Bacteria
• Replicon accession: NC_008532
• Strand: -
• Start bp: 1768438
• End bp: 1769064
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 639677475
• Product: 50S ribosomal protein L3
• Protein accession: YP_821217
• Protein GI: 116628598
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000032853
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAAAG GAATCTTAGG GAAAAAAGTG GGAATGACTC AAATCTTCAC TGAAGCAGGT 
GAATTTATCC CTGTTACTGT CATCGAAGCT ACTCCAAATG TTGTGCTTCA AGTTAAAACT 
GTTGAAACAG ACGGTTACGA AGCAGTTCAA GTTGGTTTTG ATGACAAACG TGAAGTATTA 
AGCAACAAAC CTGCCAAAGG CCACGTAGCG AAAGCTAACA CAGCTCCTAA GCGCTTCATT 
CGTGAATTCA AAAACATTGA AGGCTTAGAA GTTGGATCAG AAATCACTGT TGACATATTC 
GAAGCTGGAG ATATTGTTGA TGTAACTGGT ACTTCAAAAG GTAAAGGTTT CCAAGGTGTT 
ATCAAACGCC ACGGTCAATC ACGCGGACCT ATGGCTCACG GTTCTCGTTA CCACCGTCGT 
CCAGGTTCAA TGGGACCTGT AGCGCCTAAC CGTGTTTTCA AAAACAAACA CTTGGCAGGA 
CGTATGGGTG GCAACCGTGT GACAATTCAA AACCTTGAAA TTGTACAAGT TATCCCAGAG 
AAAAATGTTA TCCTTATCAA AGGTAACGTA CCAGGTGCTA AGAAATCTCT TATCACTATC 
AAATCAGCAG TTAAAACTGC TAAATAA 

 

Protein sequence

MTKGILGKKV GMTQIFTEAG EFIPVTVIEA TPNVVLQVKT VETDGYEAVQ VGFDDKREVL 
SNKPAKGHVA KANTAPKRFI REFKNIEGLE VGSEITVDIF EAGDIVDVTG TSKGKGFQGV 
IKRHGQSRGP MAHGSRYHRR PGSMGPVAPN RVFKNKHLAG RMGGNRVTIQ NLEIVQVIPE 
KNVILIKGNV PGAKKSLITI KSAVKTAK