| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1860 |
|---|
| Symbol | |
|---|
| ID | 4437562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1739874 |
|---|
| End bp | 1741769 |
|---|
| Gene Length | 1896 bp |
|---|
| Protein Length | 631 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639677436 |
|---|
| Product | endopeptidase O |
|---|
| Protein accession | YP_821179 |
|---|
| Protein GI | 116628560 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3590] Predicted metalloendopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.924124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCT TACAAGATGA TTTTTACCAT GCGATTAATG GTGAGTGGGA AAAGACAGCA
GTGATTCCAG ATGACAAACC ATGTACAGGT GGTTTCTCAG ATTTAGCAGA TGAAATTGAA
GACCTCATGC TTGAAACAAC TGATCAGTGG TTGGCAGGAG AGAATGTTCC TGACAATGCC
ATTCTACAAA ACTTTATAAA GTTTCACCGT ATGACTGCGG ACTATGATAG ACGTGAGGCA
GTTGGTATAG AGCCTGTTAA ACCTTTGATT GAAGAATACA AGAAGCTTTC CTCATTCTCA
GAATTTGCTT CGAAAATTGC TGAGTATGAG ATGTCTGGTA AGCCCAATGA GTTTCCATTC
AGTGTGTCTC CAGACTTTAT GAATGCTCAA TTAAATGTCC TCTGGGCTGA CGCACCGGGT
ATTATTTTGC CTGATACTAC CTATTATACG GAGGATAATG AGAAGGGAAA GGAGCTTTTA
GAAATTTGGC GTGAGATGCA AGAAGAGCTC TTGGGGAAAT ATGGCTTTAC AGCTGAGGAA
ATCAAAGACC TCTTGGATAA GGTTATTGAC CTTGATGCTA AGTTGGCTAA GTATGTCCTT
TCGCACGAAG AATCTTCAGA GTATGTAGAC CTCTACCACC CATATGATTG GGCAGATTTC
ACCAAGCTGG CGCCTGAACT CCCACTTGAT AGTATCTTCA CAGAAATCTT GGGACAAGTC
CCTGACAAGG TTATCGTCCC TGAAGAGCGC TTCTGGACAG AATTCGCGGC GGAATATTAC
TCAGAAGCAA ATTGGGAGTT ACTAAAGGCG GTCCTACTTA TCGATGCTAC AACATCATGG
AATGCCTATT TGACAGACGA ACTTCGTGTT CTATCTGGAA AATATAGCCG TGCGCTTTCA
GGAACACCAC AAGCTATGGA TAAGAAAAAA GCAGCTTTCT ACTTGGCACA AGGACCTTAC
AATCAGGCTC TAGGACTTTG GTATGCAGGT GAGAAATTCT CGCCAGAAGC CAAGGCAGAC
GTCGAAGCCA AAGTAGCAAC TATGATTGAC GTTTATAAAT CACGCCTTCA AACAGCGGAT
TGGTTGGCTC CTGAGACGCG CGAAAAAGCT ATAACGAAGC TGAATGTCAT CACACCTCAT
ATCGGTTATC CAGAAAAATT GCCAGAGACC TATGACAAGA AGATTATTGA TGAGAACTTG
TCACTGGTTG AGAATGCACA GAAGTTAGTT GAAATTTCAA TTGCTCATAG CTGGAGCAAG
TGGAATAAAC CTGTTGATCG TAGTGAGTGG CACATGCCTG CCCACATGGT TAATGCTTAC
TATGATCCAC AGCAGAACCA AATTGTTTTC CCGGCAGCTA TCCTGCAAGC ACCTTTTTAT
GATATTGCGC AAAGCTCATC AGCCAACTAT GGTGGTATTG GGGCTGTAAT TGCTCACGAG
ATTTCCCATG CCTTTGATAC TAATGGTGCT TCCTTCGATG AAAACGGTAG TCTTAAGAAC
TGGTGGACTG AAGACGATTA CGCAGCCTTT AAAGAACGTA CTGATAAAAT TGTGGACCAG
TTTGAGGGCT TGGATTCTTA TGGTGCTAAG GTCAACGGCA AACTGACTGT TTCTGAGAAT
GTGGCAGACC TTGGTGGTGT GGCGTGTGCC TTAGAAGCAG CTAAACGTGA TGAAGATTTT
TCGGTTCGAG AATTCTTTGT CAACTTTGCG ACGATTTGGC GTACGAAGGC ACGTGAAGAA
TACATGCAAA TGTTGGCTAG CGTGGATGTT CATGCCCCAG CTAAATGGCG TACCAATGTT
ATCGTGACCA ACTTCGACGA ATTTCACAAA GAATTTGACG TCAAAGAGGG AGACGGCATG
TGGCGTGCCC CAGAAGATCG TGTTATTATT TGGTAA
|
|---|
| Protein sequence | MTRLQDDFYH AINGEWEKTA VIPDDKPCTG GFSDLADEIE DLMLETTDQW LAGENVPDNA
ILQNFIKFHR MTADYDRREA VGIEPVKPLI EEYKKLSSFS EFASKIAEYE MSGKPNEFPF
SVSPDFMNAQ LNVLWADAPG IILPDTTYYT EDNEKGKELL EIWREMQEEL LGKYGFTAEE
IKDLLDKVID LDAKLAKYVL SHEESSEYVD LYHPYDWADF TKLAPELPLD SIFTEILGQV
PDKVIVPEER FWTEFAAEYY SEANWELLKA VLLIDATTSW NAYLTDELRV LSGKYSRALS
GTPQAMDKKK AAFYLAQGPY NQALGLWYAG EKFSPEAKAD VEAKVATMID VYKSRLQTAD
WLAPETREKA ITKLNVITPH IGYPEKLPET YDKKIIDENL SLVENAQKLV EISIAHSWSK
WNKPVDRSEW HMPAHMVNAY YDPQQNQIVF PAAILQAPFY DIAQSSSANY GGIGAVIAHE
ISHAFDTNGA SFDENGSLKN WWTEDDYAAF KERTDKIVDQ FEGLDSYGAK VNGKLTVSEN
VADLGGVACA LEAAKRDEDF SVREFFVNFA TIWRTKAREE YMQMLASVDV HAPAKWRTNV
IVTNFDEFHK EFDVKEGDGM WRAPEDRVII W
|
|---|
| |