Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1856 |
Symbol | |
ID | 4437558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1733726 |
End bp | 1735015 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639677434 |
Product | Na+-driven multidrug efflux pump |
Protein accession | YP_821177 |
Protein GI | 116628558 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0920105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAAA CAAAGAAAAT TTTAAACATA GCCTTACCGG CTATGGCTGA GAACCTCTTA CAAATGTTGA TGGGGATTGT TGATTCTTAC CTAGTAGCTC AGGTTGGTAT TGTTGCTATA TCGGGGGTTT CCGTGGCCAA TAATATCATT ACGATTTATC AGGCTATCTT CATTGCGCTG GGGGCTTCAA GTGCTAGTGT CATTGCTAGA AGCCTAGGAA AAGGAGACGT TAAAGCGACT AACAGAGATA TCTGGGATGC TATTATTATT ACTCTTGCTC TTAGTATCGT CTTGGGTCTA CTCTCCATTT TTTTTGGTGG AGCCATTCTT AATCTTCTGG GAACTGAGCA ATCTGTGACT CAGGCTGGCA GCCTCTATTT GGCTATAGTC GGTGGAGGTG TGATCTTTCT GGCTTTGATG ACTACCTTTG GTAACATACT ACGAGCCAAG GGACGTCCTC GTATTTCCAT GGTCGTCAGT CTTTTGACCA ATCTTCTTAA CGCTCTTCTA TCTTCTTTGG CTATTTTTGT TGGACATTGG GGGATTATTG GGGTAGCTAC AGCTACGGTT TTTTCTCGCC TAGTTGGGAC AGTCATATTA TGGACTGCAA TGAAATTGGA TGTGAAACAG TTTGAAGTTA CCAAACCTTT TAACAAGGAG TTGTTGGGAA TTGTTCTACC AGCAGCAGGT GAGCGGTTGA TGATGCGTGC AGGGGATGTT GTTATAGTAG CCATCATCGT TACCTTTGGT ACAGCAGTTG TTGGTGGTAA TGCCATTGGT GAAAATCTCA TCCAGTTTAA CTATATGCCA GGTATGGGGG TGGCTACAGC CACGGTTATC TTGGTTGCTA ATAGTTTGGG GCGAGGGGAT ACGGCGCAGA TGAAGCGTAT TATACGAGAG TCTTACTGGA TTTCAACTTT CTTGATGGTT TTGGTTTCTG GAAGCATCTT ACTTTTTGGC CAGGGCTTGT CAAGTTTCTT TACAGATAAC AAAGTAGCTA TTGCTGCTAG TCAGGTCGTT ATTCTTTATT CATTCCTAGG AAATCCCGTA ACTTCGGCGA CTTTAGTCTT CACAGCAGCC TGGCAAGGTC TTGGGAAGGC CAAGATACCT TTTTACGCAA CGACTATTGG GATGTGGCTA ATCCGAATTT TCTCAGGCTA CTTCCTAGGA GTGAGTTTGA GAATGGGCCT TGCAGGTGTC TGGATTGCAA CGGTTGTTGA TAATATATGG CGTGCGATCT TTCTCTACGT GATGTATCGT CATTATCTAG CAAAGAGACA GTTTAGATAG
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Protein sequence | MTETKKILNI ALPAMAENLL QMLMGIVDSY LVAQVGIVAI SGVSVANNII TIYQAIFIAL GASSASVIAR SLGKGDVKAT NRDIWDAIII TLALSIVLGL LSIFFGGAIL NLLGTEQSVT QAGSLYLAIV GGGVIFLALM TTFGNILRAK GRPRISMVVS LLTNLLNALL SSLAIFVGHW GIIGVATATV FSRLVGTVIL WTAMKLDVKQ FEVTKPFNKE LLGIVLPAAG ERLMMRAGDV VIVAIIVTFG TAVVGGNAIG ENLIQFNYMP GMGVATATVI LVANSLGRGD TAQMKRIIRE SYWISTFLMV LVSGSILLFG QGLSSFFTDN KVAIAASQVV ILYSFLGNPV TSATLVFTAA WQGLGKAKIP FYATTIGMWL IRIFSGYFLG VSLRMGLAGV WIATVVDNIW RAIFLYVMYR HYLAKRQFR
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