| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1846 |
|---|
| Symbol | |
|---|
| ID | 4438066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1720969 |
|---|
| End bp | 1723392 |
|---|
| Gene Length | 2424 bp |
|---|
| Protein Length | 807 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639677424 |
|---|
| Product | penicillin-binding protein 1B |
|---|
| Protein accession | YP_821167 |
|---|
| Protein GI | 116628548 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTG AAAAAATAAT AAATTATTTT AGGCGACTAG GGCAGACTAT TCGTACAAAG
TTTGCTGGTT CTAGGTCTAA AAGAGGAGAT AAATCTTTTA AAGAAAGGAA AGCTACGACT
GGATTCAAGT GGAATCGTAA GCAAGCACGG AAGTCGCCTG AGGATGGGAT GACACTCTTA
GACATGGGTG ATGTTTTCTT AAAAACCTTA AAGCTCTTGT CTGATTTCTT TTATGTGGTT
ATTATCGTTC TTACCCTATT TGGTGCAGGA ATTGGTTTGG GTTATCTGGG CAGTCAGATA
CAGTCTGTTC CATTGATTAA GGATAAAACC TTGTTGAATC AGATTGGCGA GGTTAGTTTG
GTGTCTTCGA TGAGTTATTC TGATTCTAAA AAGATTGCTG ATATTGATAC GGACCTGCTT
AGAACTCCTA TTGAAAGTGA TGCAATTTCT AATAATGTTA AAAATGCCAT TATTGCTACT
GAGGATGAAA ATTTCAATAA GCATAAGGGG GTTGTACCAA AAGCTGTCTT TAGAGCCTTG
GTATCCTCAG TCTTGGGGGT AGGTTCCTCT AGTGGTGGTT CAACCCTAAC ACAGCAGTTG
ATAAAACAAC AGGTTACAGG AGATACTCCA ACATTTAAAC GTAAAGCGGC AGAGATTATC
TATGCACTAC AACTGGAACG TCATGCTTCG AAAAATGAAA TTTTAACTGA TTATCTGAAT
GTTTCTCCTT TTGGTCGTAA CAACAAGGGG AAAAATATTG CTGGTATCGA AGAGGCTGCA
CAAGGGATCT TTGGGGTCTC TGCTGCAGAT TTGACAGTTC CTCAGGCAGC TTATCTGGCA
GGTTTACCAC AGAGCCCGAT TGTCTATTCA CCCTATACTG CGGATGGTCA ACTAAAAAAT
GAAAAAGATC TTTCCTATGG CTTGGCACGT CAGAAAGATG TGCTCTACAA TCTCTATCGA
GGCGGTTACC TAGATAAGTC ACAATACGAA AGTTATAAGA GTTATGACGT TACTAAAGAT
TTCAAGGCTG GTGAGAATCC AGATGCTGTC AGTCATGACT ATTTGTACTA TTCAGTCATG
TCTGAAGCTC AAGATATCAT GTATGATTAT TTGGTGAAGC GTGACAAGGT ATCAAGTCAA
GATTTGAAAA ATGATAAGAC AAAGGAAGCC TACCGTGAGA TGGCTCTCCG AGAGCTACAA
ACAGGTGGTT ATCATGTTAA GACAACAATT GACAATGCTG TCTACCATGC GATGCAAGAT
ACTGCGAACA AATATGGAGA TCTACTTGAT CAGGGTGGAA ATAACGGGGT CGAAGTTGGA
AATGTACTCA TGGACAATGC GACTGGAGCG ATTTTAGGAT TTGTTGGTGG TCGTAATTAT
GAGAATAACC AGAATAACCA TGCCTTTGAT ACTGCTCGTT CTCCTGGATC TTCTATTAAG
CCTATTATTG CTTATGGAAT TGCCATTGAC CAAGGTTTAA TGGGTAGCTC AAGTATCCTT
TCAAATTATC CAACTAATTT TACAGGTGGG ACACCGATTC TTCATGATGG CGATAAGGGA
ACGGCCATGA TGAATTTGCA AGAGGCGCTT AATACGTCGT GGAATATTCC TGCCTTTTGG
ACCTATCAAA TGCTTCAACA TCATGATGTT GACGTTGAGG GCTATATGAC CAAGATGGGA
TATAAGATTG CTAACTACAA TATTGAGAGT CTGCCCCTTG GTGGTGGGAT TGAAACTACT
GTTGCTCAGC AGGTAAACGC CTATCAAATG CTTTCAAATG GCGGTGTTTA TGAAAAAGGT
TATATGATTG ATAGTATTAC TGATAGCACT GGTGAGGTTA TTTATCAACA TAAATCTAAA
GGGGTTCAGG TCTTTACAAG GGCTACGGCT AGCATTATGG ATAACTTACT TAAAGAAGTT
GTGGTTAAGG GAGCGACAAC CCAATTTTAT TCGGAGTTGA AAAATGTCAA TGGTGCAGCG
GCCTCAGCTG ACTGGATGGG TAAAACAGGG ACAACTGATA ACTTTGCTGA TGCTTGGTTG
GTTGTGTCGA CGCCTGGCAT TACCCTTGGG GGTTGGGCTG GTTATGATGA CAATGCACCT
ACCAATTCTA AAATGGGTTA CACTTACAAT GCCCAATATA TGGCTCGTTT GACTTCAGCC
ATCTATAATG CTAATCCAGG TATTTTCAAA ACGGGAGATA AGTTTAATAT AGATTCAAGC
GCCATTAAGG CAAGTGTGCT CAAGTCGACA GGCCTTAAGC CAGCAACGGT ATCGGTCAAT
GGCCGTAATG TCTCCGTAAG TGGTGAAATG GTTGATAGTT ATTGGGCTAA AAATGGACCT
GGCGATACAA TCTACAAGTT TGCCATTGGT GGAACGGATA GTGACTACCA AAAAGCTTGG
TCTAGTATTC TTGGAGAACA TTAG
|
|---|
| Protein sequence | MNFEKIINYF RRLGQTIRTK FAGSRSKRGD KSFKERKATT GFKWNRKQAR KSPEDGMTLL
DMGDVFLKTL KLLSDFFYVV IIVLTLFGAG IGLGYLGSQI QSVPLIKDKT LLNQIGEVSL
VSSMSYSDSK KIADIDTDLL RTPIESDAIS NNVKNAIIAT EDENFNKHKG VVPKAVFRAL
VSSVLGVGSS SGGSTLTQQL IKQQVTGDTP TFKRKAAEII YALQLERHAS KNEILTDYLN
VSPFGRNNKG KNIAGIEEAA QGIFGVSAAD LTVPQAAYLA GLPQSPIVYS PYTADGQLKN
EKDLSYGLAR QKDVLYNLYR GGYLDKSQYE SYKSYDVTKD FKAGENPDAV SHDYLYYSVM
SEAQDIMYDY LVKRDKVSSQ DLKNDKTKEA YREMALRELQ TGGYHVKTTI DNAVYHAMQD
TANKYGDLLD QGGNNGVEVG NVLMDNATGA ILGFVGGRNY ENNQNNHAFD TARSPGSSIK
PIIAYGIAID QGLMGSSSIL SNYPTNFTGG TPILHDGDKG TAMMNLQEAL NTSWNIPAFW
TYQMLQHHDV DVEGYMTKMG YKIANYNIES LPLGGGIETT VAQQVNAYQM LSNGGVYEKG
YMIDSITDST GEVIYQHKSK GVQVFTRATA SIMDNLLKEV VVKGATTQFY SELKNVNGAA
ASADWMGKTG TTDNFADAWL VVSTPGITLG GWAGYDDNAP TNSKMGYTYN AQYMARLTSA
IYNANPGIFK TGDKFNIDSS AIKASVLKST GLKPATVSVN GRNVSVSGEM VDSYWAKNGP
GDTIYKFAIG GTDSDYQKAW SSILGEH
|
|---|
| |