| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1845 |
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| Symbol | rpoB |
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| ID | 4438065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 1717025 |
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| End bp | 1720606 |
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| Gene Length | 3582 bp |
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| Protein Length | 1193 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639677423 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_821166 |
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| Protein GI | 116628547 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAGGAC ATGACGTTCA ATACGGGAAG CATCGTACCC GTCGTAGTTT TTCAAGAATC
AAAGAAGTTC TTGGTTTACC AAACTTGATT GAAATCCAAA CGGATTCATT CAAAGAATTC
TTAGATACTG GTCTTAAAGA GGTTTTTGAG GATGTACTTC CTATTTCAAA CTTCACAGAC
ACCATGGAAT TGGAATTTGT TGGTTACGAA TTGAAGGAAC CTAAGTATAC ACTTGAAGAA
GCTCGTATCC ATGATGCATC ATACTCAGCA CCAATCTTTG TGACTTTCCG TCTTATTAAC
AAAGAAACTG GTGAAATTAA AACTCAGGAA GTCTTCTTCG GAGATTTCCC AATTATGACT
GAGATGGGTA CTTTTATCAT CAATGGTGGT GAACGTATTA TCGTTTCTCA GTTGGTGCGC
TCACCTGGTG TTTACTTTAA CGATAAGGTC GATAAAAACG GTAAAGTGGG TTACGGATCA
ACAGTTATTC CTAACCGTGG GGCATGGCTT GAGCTTGAAA CTGATTCAAA AGACATCGCC
TACACTCGTA TCGACCGTAC GCGTAAGATT CCATTTACAA CGCTTGTGCG TGCACTTGGA
TTCTCAGGTG ATGACGAAAT TGTTGATATC TTTGGTGATA GCGAGTTGGT TCGTAACACT
ATTGAAAAAG ATATCCACAA AAATCCAGCA GATTCACGTA CTGATGAAGC GCTTAAAGAA
ATTTATGAAA GACTTCGTCC AGGTGAACCA AAAACTGCTG ACAGCTCACG TAGCTTGCTT
GTAGCTCGTT TCTTTGATCC ACGTCGTTAC GACTTGGCTG CTGTTGGTCG TTACAAACTT
AACAAAAAAC TTAACATCAA GACACGTCTT TTGGGACAAA CAATTGCTGA AAACTTGGTA
GATCCTGAAA CAGGTGAAAT CCTTGTTGAA GCTGGGACTG AAATGACACG TGATGTGATT
GATTCAATCG CAGAACACTT GGACGGTGAT TTGAACAAAT TTGTATACAC ACCAAACGAT
TATGCAGTGG TTACAGAACC TGTTGTTCTT CAAAAATTCA AGGTCGTTGC ACCAAATGAT
CCAGATCGTG TGGTTACAAT TGTTGGTAAT GCCAATCCAG ATGATAAAGT TCGTGCTTTG
ACAACAGCGG ATATCTTGGC TGAAATGAGC TACTTCCTCA ACCTTGCTGA AGGTATCGGT
AAAGTAGATG ATATCGACCA CCTTGGTAAC CGTCGTATCC GTGCCGTTGG TGAATTGCTT
GCTAACCAAT TCCGTATTGG TTTGGCTCGT ATGGAACGAA ACGTGCGTGA ACGTATGTCA
GTTCAAGATA ATGAAGCCTT GACACCACAA CAAATCATCA ATATTCGTCC TGTAACTGCA
GCTGTTAAAG AATTCTTCGG TTCTTCACAG TTGTCACAGT TCATGGACCA GCACAACCCA
TTGTCAGAGT TGTCACACAA ACGTCGTTTG TCAGCCTTGG GACCTGGTGG TTTGACACGT
GACCGTGCCG GATATGAAGT TCGTGACGTG CATTACACGC ACTACGGTCG TATGTGTCCA
ATTGAAACAC CTGAAGGACC TAACATTGGT TTGATCAATA ACTTGTCTAC ATACGGACGC
CTTAACAAGT ACGGTTTCAT TCAAACACCA TATCGTAAGG TTGACCGTGC AACTGGTAAA
GTAACAAACG AAGTGGTTTG GTTGACTGCC GACGAAGAAG ATGAGTACAT AGTTGCTCAG
GCTAACTCTA AATTGAACGA AGATGGAACA TTTGCAGAAG AAATTGTCAT GGGTCGTCAC
CAAGGTGTTA ACCAAGAGTA CCCATCACAC CTTGTAGATT TCGTGGATGT TTCTCCTAAA
CAGGTAGTTG CCGTTGCGAC AGCATGTATT CCTTTCTTGG AAAACGATGA CTCTAACCGT
GCCCTCATGG GTGCCAACAT GCAACGTCAA GCTGTGCCAT TGATTGATCC AAAAGCACCA
TTTGTTGGTA CTGGTATGGA ATATCAAGCT GCCCACGATT CAGGTGCTGC AGTTATCGCT
AAACATGATG GTAAAGTTGT CTATTCTGAT GCCGATAAGG TTGAAGTTCG TCGTGAAGAT
GGTTCTCTTG ACGTCTATAC TATTCAAAAA TTCCGTCGTT CAAACTCAGG TACTGCGTAT
AACCAACGTA CTTTGGTTAA GGTTGGTGAT ATTGTCGAAA AAGGAGATTT TATCGCTGAT
GGTCCATCTA TGGAAGGTGG AGAAATGGCC CTCGGTCAAA ACCCTATTGT CGCATACATG
ACATGGGAAG GTTACAACTT CGAGGATGCT GTTATCATGA GTGAACGCCT AGTGAAAGAC
GATGTTTATA CATCTGTTCA CTTGGAAGAA TTCGAATCAG AAACACGTGA TACAAAGCTT
GGACCTGAAG AAATCACACG TGAATTGCCA AACGTTAGTG AAGAAGCCCT TAAAAACCTT
GACGAAATGG GTATTATCCG TATCGGTGCT GAGGTTAAAG AAGGTGATAT TCTTGTTGGT
AAGGTAACAC CTAAGGGTGA AAAAGACCTT TCTGCTGAAG AACGTCTTCT CCATGCTATC
TTTGGTGATA AATCTCGTGA AGTACGTGAT ACATCACTCC GTGTACCTCA TGGTGGTGAT
GGTGTCGTTC GTGATGTTAA AATCTTTACA CGTGCAAACG GTGATGAATT GCAATCAGGT
GTTAACATGC TTGTTCGTGT TTACATCGCT CAAAAACGTA AAATCAAGGT CGGAGATAAG
ATGGCTGGTC GTCACGGTAA CAAAGGGGTT GTTTCTCGTA TTGTTCCTGT TGAAGACATG
CCTTACCTTC CAGACGGTAC ACCAGTTGAC ATCATGTTGA ACCCTCTTGG GGTACCATCA
CGTATGAATA TTGGTCAGGT TATGGAACTT CACCTTGGTA TGGCTGCTCG TAACTTGGGT
ATCTACATCG CAACACCAGT CTTTGATGGG GCAAGCTCAG AAGATCTCTG GGATACTGTT
CGTGAAGCTG GTATGGATAG TGATGCTAAG ACAATCCTTT ACGATGGACG TACAGGAGAG
CCATTTGATA ACCGTGTGTC AGTTGGTGTC ATGTACATGA TCAAACTTCA CCACATGGTT
GATGATAAAC TTCACGCTCG TTCGGTAGGT CCTTACTCAC TCGTTACCCA ACAACCTCTT
GGTGGTAAAG CACAATTTGG TGGACAACGT TTCGGTGAGA TGGAGGTTTG GGCTCTTGAA
GCTTACGGTG CTTCAAACAT TCTTCAAGAA ATCTTGACTT ACAAGTCAGA TGACGTTAAC
GGACGTTTGA AAGCCTATGA AGCTATCACT AAAGGAAAAC CAATTCCAAA ACCAGGTGTA
CCAGAATCAT TCCGAGTGCT CGTTAAAGAA TTGCAATCAC TTGGTCTTGA TATGCGTGTT
CTTGATGAGG ATGACTATGA AGTTGAATTG CGTGATCTTG ATGAAGGTGA AGATGATGAC
GTCATGCACG TTGATGATCT TGAAAAAGCA CGTGTACAAC AAGCCAAAGA AGCTGCTGAA
TTAGAAAAAG CTAAAGAAGA AGCTTTAGAT AAAACAGAAT AA
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| Protein sequence | MAGHDVQYGK HRTRRSFSRI KEVLGLPNLI EIQTDSFKEF LDTGLKEVFE DVLPISNFTD
TMELEFVGYE LKEPKYTLEE ARIHDASYSA PIFVTFRLIN KETGEIKTQE VFFGDFPIMT
EMGTFIINGG ERIIVSQLVR SPGVYFNDKV DKNGKVGYGS TVIPNRGAWL ELETDSKDIA
YTRIDRTRKI PFTTLVRALG FSGDDEIVDI FGDSELVRNT IEKDIHKNPA DSRTDEALKE
IYERLRPGEP KTADSSRSLL VARFFDPRRY DLAAVGRYKL NKKLNIKTRL LGQTIAENLV
DPETGEILVE AGTEMTRDVI DSIAEHLDGD LNKFVYTPND YAVVTEPVVL QKFKVVAPND
PDRVVTIVGN ANPDDKVRAL TTADILAEMS YFLNLAEGIG KVDDIDHLGN RRIRAVGELL
ANQFRIGLAR MERNVRERMS VQDNEALTPQ QIINIRPVTA AVKEFFGSSQ LSQFMDQHNP
LSELSHKRRL SALGPGGLTR DRAGYEVRDV HYTHYGRMCP IETPEGPNIG LINNLSTYGR
LNKYGFIQTP YRKVDRATGK VTNEVVWLTA DEEDEYIVAQ ANSKLNEDGT FAEEIVMGRH
QGVNQEYPSH LVDFVDVSPK QVVAVATACI PFLENDDSNR ALMGANMQRQ AVPLIDPKAP
FVGTGMEYQA AHDSGAAVIA KHDGKVVYSD ADKVEVRRED GSLDVYTIQK FRRSNSGTAY
NQRTLVKVGD IVEKGDFIAD GPSMEGGEMA LGQNPIVAYM TWEGYNFEDA VIMSERLVKD
DVYTSVHLEE FESETRDTKL GPEEITRELP NVSEEALKNL DEMGIIRIGA EVKEGDILVG
KVTPKGEKDL SAEERLLHAI FGDKSREVRD TSLRVPHGGD GVVRDVKIFT RANGDELQSG
VNMLVRVYIA QKRKIKVGDK MAGRHGNKGV VSRIVPVEDM PYLPDGTPVD IMLNPLGVPS
RMNIGQVMEL HLGMAARNLG IYIATPVFDG ASSEDLWDTV REAGMDSDAK TILYDGRTGE
PFDNRVSVGV MYMIKLHHMV DDKLHARSVG PYSLVTQQPL GGKAQFGGQR FGEMEVWALE
AYGASNILQE ILTYKSDDVN GRLKAYEAIT KGKPIPKPGV PESFRVLVKE LQSLGLDMRV
LDEDDYEVEL RDLDEGEDDD VMHVDDLEKA RVQQAKEAAE LEKAKEEALD KTE
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