Gene STER_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1840 
Symbol 
ID4438060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1710438 
End bp1710764 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content39% 
IMG OID639677418 
Productlate competence protein, exogenous DNA-binding protein 
Protein accessionYP_821161 
Protein GI116628542 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4537] Competence protein ComGC 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.63084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGA TGTTAAAAAA ATTGAATGCC GTTAAATTAC GAGCCTTTAC TCTGATTGAA 
ATGCTAGTCG TACTTCTCAT TATCAGTATT CTCCTTTTGC TCTTTGTTCC TAACTTAAGC
AAGCAGAAGG ATTCCGTTAA GGAAACTGGA AATGCGGCTG TAGTCAAGGT CGTGGATTCT
CAGGCAGAAC TTTATGAAAT GAAGAATAAC AAGACAGCTA GCTTGGCAGC TCTTGTTTCA
GAAGGTCAAA TTACGCAAAA ACAGGCAGAT TCATACAATG ATTACTATGC GAAACATGGT
GGTGAAAGCC GCTCAGTGGC CAATTAG
 
Protein sequence
MKLMLKKLNA VKLRAFTLIE MLVVLLIISI LLLLFVPNLS KQKDSVKETG NAAVVKVVDS 
QAELYEMKNN KTASLAALVS EGQITQKQAD SYNDYYAKHG GESRSVAN