| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1789 |
|---|
| Symbol | |
|---|
| ID | 4437588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1672139 |
|---|
| End bp | 1672945 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639677374 |
|---|
| Product | preprotein translocase subunit YidC |
|---|
| Protein accession | YP_821117 |
|---|
| Protein GI | 116628498 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0706] Preprotein translocase subunit YidC |
|---|
| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000505185 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAAAA AACTTAGTTT ATCTATTTTA GGGACAGGAG CTCTCTTGCT TTTGTCGGCT
TGTGGACATG GTGACGTTAC AAGTCAATCT AGTGGCGTTT GGGAACGTCT CATTTTAACC
TTTGGTAAGG CTATTCAAGG ACTCTCATTT GGAGGATCCA TTGGATTAGG TATTATCATT
TTTACGATTT TGATTCGTGC GGTCATGATT CCTTTGTATA ACCGCCAAAT TAAGTCAAGT
CGTGAATTGC AAGAGCTTCA GCCAGAGTTG CGTCGCTTAC AGAGTGAGTA TCCTGGCCGA
GAGAATCGTG AGGCCCTGGC TTATGCACAA CAAGAACTTT ATAAAGAGCA TGGTGTAAAT
CCTTACGCAA GTTTCCTTCC TCTCATAATT CAGTTTCCTA TTTTGATGGC TCTTTATGGA
GCTCTTACAC GTGTGCCAGA GTTGCGAGAA GGATCTTTCT TGTGGGTTGA TCTTGGTCAA
AAAGATCCGT ACTTCATTCT TCCGATTCTG GCGGCAGCTT TTACTTTCCT TTCAACTTGG
TTGACGAATA AGGTTGCTAA AGATCGTAGT GCTATGCTTA TTGTCATGAA TATCATGCTT
CCAATCTTTA TTTTTTGGTT TGGGACACAG ATTTCTTCAG GGGTAGCACT TTATTGGACA
GTTTCAAATG CTTTCCAAGT CGTTCAAATT TTAGTTTTTA ATAACCCATT TAAAATCATT
GCTGAGCGTA ACCGTTTGGA AGCAGAAGAA AAAGAACGTA AAGCTAAGAT TCGTCGTGCC
AAGAAAAAGG CGAATAAACG TAAATAA
|
|---|
| Protein sequence | MKKKLSLSIL GTGALLLLSA CGHGDVTSQS SGVWERLILT FGKAIQGLSF GGSIGLGIII
FTILIRAVMI PLYNRQIKSS RELQELQPEL RRLQSEYPGR ENREALAYAQ QELYKEHGVN
PYASFLPLII QFPILMALYG ALTRVPELRE GSFLWVDLGQ KDPYFILPIL AAAFTFLSTW
LTNKVAKDRS AMLIVMNIML PIFIFWFGTQ ISSGVALYWT VSNAFQVVQI LVFNNPFKII
AERNRLEAEE KERKAKIRRA KKKANKRK
|
|---|
| |