| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1777 |
|---|
| Symbol | |
|---|
| ID | 4437610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 1660609 |
|---|
| End bp | 1661391 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639677362 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_821110 |
|---|
| Protein GI | 116628491 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00129852 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAG ATGCAATGAT TACCTATCTC ATAGGTGAAC TCAAAAAAGA AAATCTAGAA
TTACATGATT TGATTGTTCC AGAAGAGCTC GAAGAAAAGC AGAAACTCCT AAGAGCACTC
TTTAATACTC GTAAACCAAT GGCAGCATCA ACACAATTCT TGACCATACA AGACCTTTAC
CTACAAGTTA GAAAAGGTGA ACGAGGAATT GTACAACTCA ACTCTCTCCA GTCTATTCCT
CAAGATAAGA GAATCTATCT ATGGAAAGGT GATATTACAA GACTAGAGAT CGATGCAATA
GTAAATGCAG CAAATAAGAC CTTACTTGGA TGTATGAAAC CACTCCATAA TTGTGTTGAT
AATGCTATTC ATACATATGC AGGTGTCCAG TTACGTCAGG CTTGTTTTGA ACTCATCTTA
GAACAAGGAT ATGAAGAACC AGTAGGAATG GCTAAAATAA CCCCAGCCTA CAATCTCCCT
TCTGCCTTTG TTATCCATAC AGTTGGTCCA AAAATTGGAA ACCAAGTAAC ACCAATTGAC
GAAGATCTTT TGATTAAATC ATATCTTTCA GTATTAGCAC TAGCTGAAAA AAACAAGATA
GAATCAATTG CTATACCATG TATATCAACT GGCGATTTCA ATTTTCCAAA ACAAAAAGCA
GCAGAGATCG CAATCAAAAC TGTAAAATCC TTTATTGATC ACTCTGAAAT TGTTAAAAAA
GTTATTTTTA ACGTCTTTGA TGATGAAAAT TTAAATATTT ATCAAAAACT TCTTGCAGAA
TAA
|
|---|
| Protein sequence | MDKDAMITYL IGELKKENLE LHDLIVPEEL EEKQKLLRAL FNTRKPMAAS TQFLTIQDLY
LQVRKGERGI VQLNSLQSIP QDKRIYLWKG DITRLEIDAI VNAANKTLLG CMKPLHNCVD
NAIHTYAGVQ LRQACFELIL EQGYEEPVGM AKITPAYNLP SAFVIHTVGP KIGNQVTPID
EDLLIKSYLS VLALAEKNKI ESIAIPCIST GDFNFPKQKA AEIAIKTVKS FIDHSEIVKK
VIFNVFDDEN LNIYQKLLAE
|
|---|
| |