| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1726 |
|---|
| Symbol | rpsR |
|---|
| ID | 4437650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1616337 |
|---|
| End bp | 1616576 |
|---|
| Gene Length | 240 bp |
|---|
| Protein Length | 79 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639677314 |
|---|
| Product | 30S ribosomal protein S18 |
|---|
| Protein accession | YP_821063 |
|---|
| Protein GI | 116628444 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0238] Ribosomal protein S18 |
|---|
| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.146764 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAC AACGTCGTGG CGGATTCAAA CGCCGTAAAA AATTTGATTA CATCGCAGCT
AACAAAATCG AATATGTTGA TTACAAAGAT ACTGAGCTTC TTAGCCGTTT CGTTTCAGAA
CGTGGTAAAA TTCTTCCACG TCGTGTAACA GGAACTTCAG CTAAAAACCA ACGTAAAGTA
ACAACAGCTA TTAAACGCGC TCGCGTTATG GCACTTATGC CTTACGTAAA CGAAGATTAA
|
|---|
| Protein sequence | MAQQRRGGFK RRKKFDYIAA NKIEYVDYKD TELLSRFVSE RGKILPRRVT GTSAKNQRKV
TTAIKRARVM ALMPYVNED
|
|---|
| |